Gene Ssol_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1781 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1589011 
End bp1590021 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content37% 
IMG OID 
Productisopropylmalate/isohomocitrate dehydrogenase 
Protein accessionACX91997 
Protein GI261602394 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTTC GAGTAGCTGT AATTCCTGGT GATGGAATAG GCCCTGAGTT ATATGAGGGA 
AGTAAAAGAA TTATAGCTAA GTTAATAGAG AAATATAATC TTGATATAGA CTTAATTGAA
GTTGAAGCTG GAGATGTCGC ATTAAATAAA TATGGTGAAG CCTTACCTAG ACACACCTTA
GACGTTATAG AAAAGGCGGA TATGATTCTA AAAGGTCCGG TTGGAGAGAC CGCAATGGAT
GTTGTAGTTA AATTGAGGCA AATGTATGAT ATGTACGCTA ATATTAGACC GGCTAAATCA
CTGCCTAATG TTCAGTCGAA ATATCCGAAC GTTGATTTAG TAATCGTCAG GGAAAATACA
GAAGATCTAT ATAAGGGGTT TGAATTCGTT ACATCTACTG GAGTCACAAT AGCTATTAAA
GTAACTACTG AGTTTGCCTC TAAAAGAATA GTTAACGTGG CATTAAATTA TGCTTTAATG
AGACGTCGTA AAGTTACATG CGTCCATAAG GCTAATGTTA TGAGAGTTAC AGACGGACTT
TTCGCTAGTG TTTGCAGAGA AATTTTGAAA GGTAAGGTGA ATTTTGAGGA GATGTATGTT
GATGCAGCTG CAGCTAATTT AGTACGAGAT CCAACTCGGT TTGATGTAAT AGTAACTAGT
AACGTTTATG GTGATATTTT AAGCGATGAG GCCAGCCAAA TAGCGGGAAG TTTAGGTCTA
GCACCATCTG CAAATATTGG AGATAGGAAA TCTATGTTCG AGCCAGTTCA TGGAGCTGCT
TTTGATATTG CGGGAAAAGG GATAGCTAAT CCTACGGCAT TTCTATTATC TGTTTCCATG
ATGCTTAGTA GAATGTATGA GTTATCTAAG GAGAATAAAT ACATTCTGGC ATCAAAGTCT
TTAGAGAATG CGATAATAGA GACTTACAAA AGTGGGAATA AGTTAACGGA GGATGTTGGT
GGTAGTGCTA AGTTAAAGGA TATGGTGGAT GAAATTTATA AATATATGTA A
 
Protein sequence
MTFRVAVIPG DGIGPELYEG SKRIIAKLIE KYNLDIDLIE VEAGDVALNK YGEALPRHTL 
DVIEKADMIL KGPVGETAMD VVVKLRQMYD MYANIRPAKS LPNVQSKYPN VDLVIVRENT
EDLYKGFEFV TSTGVTIAIK VTTEFASKRI VNVALNYALM RRRKVTCVHK ANVMRVTDGL
FASVCREILK GKVNFEEMYV DAAAANLVRD PTRFDVIVTS NVYGDILSDE ASQIAGSLGL
APSANIGDRK SMFEPVHGAA FDIAGKGIAN PTAFLLSVSM MLSRMYELSK ENKYILASKS
LENAIIETYK SGNKLTEDVG GSAKLKDMVD EIYKYM