Gene Ssol_1779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1779 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1585016 
End bp1585813 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content31% 
IMG OID 
ProductProtein of unknown function DUF171 
Protein accessionACX91995 
Protein GI261602392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.68141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGATATA GAAGGGGAAT CTTATATAAT AGGGATAAAG AAGTCTACAT GATGTTTCCT 
TTTCCACGTT ACAAACCTTT AAATGTTGTC CTTTTTTTAT CTATATTTGA TGTTGAAAAT
TCTCTTCTTG AAGTTACGTT AAAACTTTCA TTTATACTTA GAGTCACAAC TACATTTAGA
GTGAATAAAA TTTACTGGAT AACAGATTCC CTAAATTCTA GAAAACTAGA AAAAATAATT
ACAGATATTA CTAAATATGC TCTTTTACCA CCGTATCTTA AAAAATACGT TCCTATTAGT
CGTAATTTGA AGAAAGTTGG TTTAATGAGT CCACTAGGGA TACCGTATCA CTTTATTTTT
AAACAAGCTG TTGAAGGTGA GATAAGATTA GGATATAAGG GTGATTTTGG TCTGAACAAG
AAATTAAATT CATCATCGAA GACTATTTTA ATTACTGACT CACTAAAAGC TGGTTATATC
GACTATCGTG GTTTCTATTA TACTGGAGTA AAAAATGAGT TTATAGACTT TAAAAAGGTA
TTTAATTTTG ATAATCTTAT AATTGCTAGT AGGAGTGGGA AAAATCCCTT ACAAGCTAAG
GAACAGCTAA CCAATTTGTA CAATAAATAT GGCCTTACCT TGATGATTGG ACCACCAACT
GGAAATCTAT TACAAAGATT AGGTAAGCAA TACTTAGATA AGTCGTATAA CTTTGTTATT
AAACAAGGAG TTTCAGATAT TAGGGCGGAA GAGGCATTAG CTTATTCTCT GTCTATTCTA
AACCTTCTGT TAAGTTAG
 
Protein sequence
MGYRRGILYN RDKEVYMMFP FPRYKPLNVV LFLSIFDVEN SLLEVTLKLS FILRVTTTFR 
VNKIYWITDS LNSRKLEKII TDITKYALLP PYLKKYVPIS RNLKKVGLMS PLGIPYHFIF
KQAVEGEIRL GYKGDFGLNK KLNSSSKTIL ITDSLKAGYI DYRGFYYTGV KNEFIDFKKV
FNFDNLIIAS RSGKNPLQAK EQLTNLYNKY GLTLMIGPPT GNLLQRLGKQ YLDKSYNFVI
KQGVSDIRAE EALAYSLSIL NLLLS