Gene Ssol_1425 details

Gene Information

• Locus tag: Ssol_1425
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: +
• Start bp: 1317131
• End bp: 1317715
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 33%
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: ACX91658
• Protein GI: 261602055

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGTTAT ACGTCGTAAT AAAGACTCCT AATTTGCTTC AGTTTCCAGA ATTTATTCCT 
AAAAAGGTTA CAGTTAACAT TCTGGATATA AGGGTTGATG GGGAGAAAGG TAAGCTACTT 
CTCGAGATAC GTGGAGACGA AACCAGCGCT AAGCAAGTTT GTGAAGAACC TATTAAAGTT 
TCAAAGTATA AATTTATCTG TACAAATTAT ATTTCAAGTG AGTTACTTAA GATTTTATCG 
CAATATACTA TAATGAATGG TGCTTTAACA GATGATGGAA TTTTTTGGAC TTTAATACTA 
AACGGTTATA CAGAGCTTAG GGAATTACTT AACTCGCTAA TAGACATTAC AAAAGAAGTT 
AGAGTTTTAA AAGTTGTGAA AGCTGAAAAG AAAGATGCAA TAACTGCAAG GCAGGAGCAA 
ATACTAAGGA TTGCATTAGA AGCTGGATTT TTCGACTATC CTAGAAGAAT AGGATTAAAA 
GATCTGGCTA AAAAGTTAAA CATCAGTCCA TCTAGTCTAA GTGAAATTAT AAGAAGAGCT 
GAAAAGAACG TAATTACAGC TTATTTTGAA GAGAGGGAAC TATGA 

 

Protein sequence

MLLYVVIKTP NLLQFPEFIP KKVTVNILDI RVDGEKGKLL LEIRGDETSA KQVCEEPIKV 
SKYKFICTNY ISSELLKILS QYTIMNGALT DDGIFWTLIL NGYTELRELL NSLIDITKEV 
RVLKVVKAEK KDAITARQEQ ILRIALEAGF FDYPRRIGLK DLAKKLNISP SSLSEIIRRA 
EKNVITAYFE EREL