Gene Ssol_1283 details

Gene Information

• Locus tag: Ssol_1283
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: +
• Start bp: 1189309
• End bp: 1190115
• Gene Length: 807 bp
• Protein Length: 268 aa
• Translation table: 11
• GC content: 35%
• Product: shikimate kinase
• Protein accession: ACX91519
• Protein GI: 261601916

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGCCT ATGGAGGAGT CTCAATCGTA AACGCACTAC CATCTTGGTA TGGCTCATCT 
ATGGCAATCA ATTTGAAGGT AAAAGTAGAA ATTAGAGAAG GTAAGAGAGT TTATTCTCAA 
GAGAGTGAAC TAATTAAGAC CATTCTTAAT TACTTTAAAG AAAAATATTC AATACCGGAT 
ATTGAAGTTG ATATTGAATC TGAACTTCCA CAAAAGAGTG GACTAAAAAG CAGTAGTGCA 
GTTTCTGTAG CCCTAATAGC GGAGATTGCA AAGCAATATG ATCTAAGGAA TATTAACCCT 
CCAATATTAT CTGCGATACT TTCACTGAAA GCTGGAGTGT CATATACCGG GGCACTTGAT 
GATGCAGTTG CATCATATTG TGGAGGAATA GCATTCACTT ATAATAAGAT GTTTAGAATA 
GTAAAGTTAG AGAATCTTGA GGATAATTTA TCGATCCTCA TATTAGCTAA GGGAGGGAGA 
CAAAAACCTG TTAATCTAAA CGAGCTAAGA AAATATAGTC ACGTCTTTGA AGAAATTTTT 
AAGATAGCAC TTAAGGATTA CTTGACTGCT ATGAAGATGA ATGGAATATT GATTGCTAAT 
ATTTTAGGCT ATTCATTAGA ACCAATAGAA ATTGCACTGA AAAAAGGAGC GTTAGCTGCC 
GGGATTAGTG GAAATGGGCC TTCATATTTT GCAGTTTCTA AGAATGGAGA AGAAGGTCCG 
ATATACGAAA GTCTTAAGAA ATTTGGAGAT GTTATTATAG TTAGGCCTGT AAGTCTTGAT 
TGTAAAGATT TATCCATCAA AGATTAG 

 

Protein sequence

MQAYGGVSIV NALPSWYGSS MAINLKVKVE IREGKRVYSQ ESELIKTILN YFKEKYSIPD 
IEVDIESELP QKSGLKSSSA VSVALIAEIA KQYDLRNINP PILSAILSLK AGVSYTGALD 
DAVASYCGGI AFTYNKMFRI VKLENLEDNL SILILAKGGR QKPVNLNELR KYSHVFEEIF 
KIALKDYLTA MKMNGILIAN ILGYSLEPIE IALKKGALAA GISGNGPSYF AVSKNGEEGP 
IYESLKKFGD VIIVRPVSLD CKDLSIKD