Gene Ssol_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1276 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1182559 
End bp1183383 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content39% 
IMG OID 
ProductTransketolase domain protein 
Protein accessionACX91512 
Protein GI261601909 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG GTGGAGGGAG TGATGGAACT CCAATATCAA TAGAGGAATT GGACAAGTTA 
AGACAAGTAG CTGAAAAGGC AAGAAGAAAT GTAATAAAAA TGCTATTTTA TGATCAAACA
ATACATGTGG GATCGTCCCT AAGTAGCATA GAGATATTAA CTACGTTAAT ATTCAAGCAT
ATAAGGACGG ATTCAAGCTT AGTGAATAAA GACTGGCTTA TTTTAAGTAA AGGCCATGCA
GCGCCAGCTC TTTATGCCGT TTTAGCTGAA AAAGGTTACA TAAAAGAAGA GGAACTTTGG
AGAATACAAG ATATAACGGG ATTATTACAA GGGCATCCAG AAACTTTTAT TCCCGGTGTA
GATATGTCGA CTGGTAGTTT AGGGCAAGGT TTGAGCTTTG GAATAGGTGT TGCTACTGGT
ATAAAGATGG CCAACGGCAC TGGAAGAGTA TATGTCATAA TGGGTGATGG TGAACAGGAT
GAGGGAGAAA TATGGGAGGC TATGACGCAT GCAGTAGTTA GAAATCTTGA TAACTTAATT
GCATTTATAG AGATGAACAA TTTCCAGCTT GATGGTTCAA CAGATGAGAT AAAACCAAAG
AACTTCTTAC CTAAGGTATG GGAAGCAGTA GGTTGGAAAG TATTAAACTG CGATGGGCAT
GATTTCATTA GTATTACTAA TGCAGTTAAC GAGGCATATA AGGCAAGCAA GCCCGTAGTA
ATATTCGCTA AGACTGTAAG AGGAAAGGGG TTTCCTCCAA TAGAAAATAC CCATAAACAG
AGGTCCAGTC CAGATGATGC AAGGAAATAT TTACTCAATG CGTGA
 
Protein sequence
MEKGGGSDGT PISIEELDKL RQVAEKARRN VIKMLFYDQT IHVGSSLSSI EILTTLIFKH 
IRTDSSLVNK DWLILSKGHA APALYAVLAE KGYIKEEELW RIQDITGLLQ GHPETFIPGV
DMSTGSLGQG LSFGIGVATG IKMANGTGRV YVIMGDGEQD EGEIWEAMTH AVVRNLDNLI
AFIEMNNFQL DGSTDEIKPK NFLPKVWEAV GWKVLNCDGH DFISITNAVN EAYKASKPVV
IFAKTVRGKG FPPIENTHKQ RSSPDDARKY LLNA