| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssol_1160 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfolobus solfataricus 98/2 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | CP001800 |
|---|
| Strand | + |
|---|
| Start bp | 1078915 |
|---|
| End bp | 1080195 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | |
|---|
| Product | glutamyl-tRNA reductase |
|---|
| Protein accession | ACX91398 |
|---|
| Protein GI | 261601795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.319065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGG ATGAAGAGTT ACTACAAAAT TATTGTTCGA TTTTATTTAC ATACAAAACT
ATAGGAATAA GTAACCTTCA CTTATATTAC TTTAGGGAAA CGGAAATAAA ATCGTTAAAA
CAATTAATCA ATGCTGAATT TGCTATTCTA CAAACTTGTA ATAGAGTTGA AATATATCTA
TATTCAGATA CTAATACATT AAAGGAGGTT AATAAAATAA TCCAATATTT GAATAACATA
CATAATGAAC CTATCGGAAA TCAAGCTAGG GTACTCTGTG GTAAAGATGC TGCAAAACAC
TTATTTTTGG TAGCTAGTGG AGCTGATTCA CTATCTATTG GAGAATACGA AATCTTATCT
CAAATAAGAT CTACTATTGA TATGTTTAAA AAATTAGGCT TCAGCGGAAA ATATTTACAA
ATATTTTTCG AAAGAGCAAT TAAAGTAGGC AGAAAAGTTA GAGAAGAGAC TAGTATTTCT
AAGGGGAAAG TTGGTATATA TTCTCTTGCT ATTGATGAGG CTAAAAAACG ATTCAATGAT
TTTTATGATA GAAGAATATT AGTAATAGGA GCTGGCGAAA TGGCGCAGAA AATAACTAGT
ATGCTCCACA ATGAAGGAGC CAAAGATGTT ACAATAATGA ATAGAACAAT AGAAAAGGCA
AAACAACTTG CACTAAAGTT CGGCTATAAC TACGAAAAAT TAGATTTAGA CAAGTTAGGT
AACTTCGATG TCGCTTTTAT ATCAATTTAT CATGAGAATC TTAGACTTGA GAACAAATGG
AATACATTAA TTGTTGATAT AACTGTCCCG CCCCTATTTA CTGGGAATAA CGTAATTACA
CTAGAAGAAT TAGAAAGAAT ATCAAACCTC AACTTCAAAG CTAGAGAAGA GGAATTAGCT
AAAATTAATA AATTGGTAGA GGATGGAATA AATGAATTAC TATATGATTA CAAAAAAGAA
ATCTATACGG AATTCATGTC AAAAATAATG AAAAGGATAG AAACTATAAG AGAAAACGAG
ATTCTAAGAG CGTATAAAGA ACTTGAGAAA CTTGGAATAA ACGACCAACA AGCGAAGGAA
ATACTAGATT TGATGACTAG ATCAATCATT AAAAAGTCAT TCCAACCCCT TTTCGATAAT
ATAAGATCAC TAATATTTAA CGGAGAAAAT TCGATAAACT ACATTAACTT TCTAATTGAT
ATTTTTAAAG ATGGTAACAT TTCCGGTTTT GAGACCGAGA AGATTAAGGA AAAGCAAGTT
AGTGAGAGAT CTAGTATCTG A
|
|---|
| Protein sequence | MSKDEELLQN YCSILFTYKT IGISNLHLYY FRETEIKSLK QLINAEFAIL QTCNRVEIYL
YSDTNTLKEV NKIIQYLNNI HNEPIGNQAR VLCGKDAAKH LFLVASGADS LSIGEYEILS
QIRSTIDMFK KLGFSGKYLQ IFFERAIKVG RKVREETSIS KGKVGIYSLA IDEAKKRFND
FYDRRILVIG AGEMAQKITS MLHNEGAKDV TIMNRTIEKA KQLALKFGYN YEKLDLDKLG
NFDVAFISIY HENLRLENKW NTLIVDITVP PLFTGNNVIT LEELERISNL NFKAREEELA
KINKLVEDGI NELLYDYKKE IYTEFMSKIM KRIETIRENE ILRAYKELEK LGINDQQAKE
ILDLMTRSII KKSFQPLFDN IRSLIFNGEN SINYINFLID IFKDGNISGF ETEKIKEKQV
SERSSI
|
|---|
| |