Gene Ssol_0840 details

Gene Information

• Locus tag: Ssol_0840
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: +
• Start bp: 783310
• End bp: 783972
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 34%
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: ACX91088
• Protein GI: 261601485

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.136679
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAAAA GTTACACCAT AGTGCTCTCA CACGACGATT GGAGTCGTTA CACTGAGAGA 
TTTAACGAAG AGGAATTATA TGTAAAGGTT GTAAGGAGAA TTCCATCATT AGATGGACTC 
ACTGAAAACG TTATGGGTAT AATTTACGCT AAGGACAAGG AGTTTTATAG GCAAATAATT 
AGAATGCTGA GTAGAAATGA AACAACTATT GATTTCAGAA TAATAGATGA GTACAAAAAC 
AAATCTAATA TCAGAGCAAT ATACGCATCG ATAGAGAGTC TTAAAGGAAG AATAGCTGAA 
AGATTATTAA AGGATTGTAG AATTTTTAGC ATGTCAGAAA CTATATATGA AGGAATGGAA 
AGATGGAACG TAATTGCTGA CTCCGAAAAC TTCATTAAGA TCATACCAGA GGTGAAAGAG 
CTAACTTATG AGTTTAAAAT TATTGAGGAA TCTTCAAATC CACTCCTTTC AGTAAAGGAA 
GAGCTAACGC CTAAGGAATT ATCAATTCTG AAGCTAGCCT TTGATAAGGG ATACTTCGAA 
ACGCCTAAAA GAATAGGACT AGAGGAGTTA GCAAATGAGT TGGGTATTTC TAAACCAGCC 
ATAATGCAAG TTTTAAGAAA GGCTATTGCG AAGTTGACCG AAAAGAGTAT AAAAGATTTT 
TAA 

 

Protein sequence

MIKSYTIVLS HDDWSRYTER FNEEELYVKV VRRIPSLDGL TENVMGIIYA KDKEFYRQII 
RMLSRNETTI DFRIIDEYKN KSNIRAIYAS IESLKGRIAE RLLKDCRIFS MSETIYEGME 
RWNVIADSEN FIKIIPEVKE LTYEFKIIEE SSNPLLSVKE ELTPKELSIL KLAFDKGYFE 
TPKRIGLEEL ANELGISKPA IMQVLRKAIA KLTEKSIKDF