| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssol_0646 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfolobus solfataricus 98/2 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | CP001800 |
|---|
| Strand | - |
|---|
| Start bp | 594274 |
|---|
| End bp | 595149 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | MscS Mechanosensitive ion channel |
|---|
| Protein accession | ACX90919 |
|---|
| Protein GI | 261601316 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTATA AACCCCTCAT TAAAGTTCTT TTAGCTCTAG TAATCTTGGC ACTTGTAGAC
TATTTAGCCA GCGTAATTTT AAAGACACTT ACGTTTTACT TCCCCCAAAT ATCCACTTAC
ACATCTGATA CATTTACTGC AATAACAGTT ATTATAATAG CCATAGGTGG TTTTTATATT
ATAAGAATTT TACAAGGTTT GATTTACAGT CAATTACTGA CTAGATTAGA GAAAAGCACA
GCGTCTAGCA TAAAAGTCGC CCTTGATATT ATATTTTATA CTATTCTCGT TCTCGTAATA
CTCGCTGCGT TAAAGGTAAA CTTAACTGGA GTACTAGTTG GTGGGGCTGT AGGTGGTATT
GTGATTGGTT TGGCAGTCCA GACAATTGCG CAGAATATAT TATCGGGAAT ATTAGTGACT
TCTAGTAGAA CTATAAGACT TAACGATGCA GTTTCACTAA TATCATGGAT ATGGGGAAAC
CCGATAATTG GAGAAATCAG TAAGATATCA CTACTCTTCA CAGAAGTTAA GACAATTAAT
GGAAACGTTA TTAAGATACC AAATTCAGCT TTTCTAGGGA ATACTGTATT TCAAAAATTA
GAATCGGAGC ACTCCTTAGT ATATCCTTAC CAATTATTGG TTAATGCAGA TGTACCAGCC
AACGATTTAC TTAATTTAGC TAAGGCATAT ATTAATGACT TTTTCTCTAA GGAAAAAATT
CAGTTACCTG AAATCTACTT TACTGGGAAG AATGGAGGGA CTAATGCTTT TACAGTAATT
TTGCACTTTA ACGATATAAA ACAGCTTAAT GGTATATTGA ACTTAATTAA TGGGGCATTT
GATAAGGCTT ACTGGGAGCT TAAGAAAAAG GGTTAA
|
|---|
| Protein sequence | MNYKPLIKVL LALVILALVD YLASVILKTL TFYFPQISTY TSDTFTAITV IIIAIGGFYI
IRILQGLIYS QLLTRLEKST ASSIKVALDI IFYTILVLVI LAALKVNLTG VLVGGAVGGI
VIGLAVQTIA QNILSGILVT SSRTIRLNDA VSLISWIWGN PIIGEISKIS LLFTEVKTIN
GNVIKIPNSA FLGNTVFQKL ESEHSLVYPY QLLVNADVPA NDLLNLAKAY INDFFSKEKI
QLPEIYFTGK NGGTNAFTVI LHFNDIKQLN GILNLINGAF DKAYWELKKK G
|
|---|
| |