Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_0603 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | - |
Start bp | 549116 |
End bp | 549733 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | MscS Mechanosensitive ion channel |
Protein accession | ACX90877 |
Protein GI | 261601274 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00110976 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAT CTACTACCAC AAAGGTCGGA AATGCAATAG TAAGAACAAT AATCTATATA ATCCTTTACG TTATTTTGAG TGCAATAGTT AAATATATAA TTGAATCGTT GCTACCATCA TTCAATATAC ATGCTGTGAG TTACGAATCG TACGTACAGA TATTACTGGC ATTGGCATTC GGTTATTTAA TTGTTTCCGG AATTTCCTTA ATATTCTATT ATTCGCTACT TCCAAAATAC GGCCATCCAA CTGCTGCTGC AGTGAGAAAC ATAATGAGAA TTATTGGAAT TGGCGCGTTA GCTGCAAGTA TAGCTGGTGC TGTTGCTGGA GGAGCGGCCG GTGTTGCATT AGGAGGGTTT ATAGGCATAG TAATAGGGTT CGCATCACAG CAAGTACTAG GTCAAGCAGT TGCTGGGTTG TTCTTACTAG TAGCTAGGCC ATTTAAAGTA AATGATAACG TTAACATAGT TAGCGAAGAT GGTATTGTCG AAGATGTCAG TACATTGTTT ACTACAATAC TTAAAGCTGA CGGCACTAGA GTCTTAATAC CTAATAATAT GATTATAGGG AATAAAATTT ATTTAAAACA AACGGAGCAA CAACAAAAAC CTCAATAA
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Protein sequence | MAKSTTTKVG NAIVRTIIYI ILYVILSAIV KYIIESLLPS FNIHAVSYES YVQILLALAF GYLIVSGISL IFYYSLLPKY GHPTAAAVRN IMRIIGIGAL AASIAGAVAG GAAGVALGGF IGIVIGFASQ QVLGQAVAGL FLLVARPFKV NDNVNIVSED GIVEDVSTLF TTILKADGTR VLIPNNMIIG NKIYLKQTEQ QQKPQ
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