Gene Ssol_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0603 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp549116 
End bp549733 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content37% 
IMG OID 
ProductMscS Mechanosensitive ion channel 
Protein accessionACX90877 
Protein GI261601274 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00110976 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAT CTACTACCAC AAAGGTCGGA AATGCAATAG TAAGAACAAT AATCTATATA 
ATCCTTTACG TTATTTTGAG TGCAATAGTT AAATATATAA TTGAATCGTT GCTACCATCA
TTCAATATAC ATGCTGTGAG TTACGAATCG TACGTACAGA TATTACTGGC ATTGGCATTC
GGTTATTTAA TTGTTTCCGG AATTTCCTTA ATATTCTATT ATTCGCTACT TCCAAAATAC
GGCCATCCAA CTGCTGCTGC AGTGAGAAAC ATAATGAGAA TTATTGGAAT TGGCGCGTTA
GCTGCAAGTA TAGCTGGTGC TGTTGCTGGA GGAGCGGCCG GTGTTGCATT AGGAGGGTTT
ATAGGCATAG TAATAGGGTT CGCATCACAG CAAGTACTAG GTCAAGCAGT TGCTGGGTTG
TTCTTACTAG TAGCTAGGCC ATTTAAAGTA AATGATAACG TTAACATAGT TAGCGAAGAT
GGTATTGTCG AAGATGTCAG TACATTGTTT ACTACAATAC TTAAAGCTGA CGGCACTAGA
GTCTTAATAC CTAATAATAT GATTATAGGG AATAAAATTT ATTTAAAACA AACGGAGCAA
CAACAAAAAC CTCAATAA
 
Protein sequence
MAKSTTTKVG NAIVRTIIYI ILYVILSAIV KYIIESLLPS FNIHAVSYES YVQILLALAF 
GYLIVSGISL IFYYSLLPKY GHPTAAAVRN IMRIIGIGAL AASIAGAVAG GAAGVALGGF
IGIVIGFASQ QVLGQAVAGL FLLVARPFKV NDNVNIVSED GIVEDVSTLF TTILKADGTR
VLIPNNMIIG NKIYLKQTEQ QQKPQ