Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_0583 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | + |
Start bp | 531341 |
End bp | 532267 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | MscS Mechanosensitive ion channel |
Protein accession | ACX90859 |
Protein GI | 261601256 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.330876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTAA ACGAAAGAAG AGTAATAGCA CTCATCTTAA CTGTAGTATT AGCTGGAATA GCACTCGGCG GTGGTGTTTT CGTACTATCC AGCGTATTTA AGATAATACC TGCTGATTAT CTACTCTATA TTTACGCTGC AATTTGGTTT ATAGTTGCGG TTATTGTTTC GTACTTTATA GGCTCTCTTA TTAGGAATAG ATTAGGAGAT GTAATAGGTT ACGATAACGC TAGCAGTATT TCATTTGTAG TTAGACTAAT TGGATATATC ATAGCATTCG TAGGATTCTT TGTACTAATT AGGGTAAGTT TGGGTACTGC GTTAGCTGCT GGTGGTTTCG CGGGATTAGT GTTAGGTTTA GCTGCCCAAG ACGTTCTTGC CAACATATTC GGCGGGATAA TGATAGTGAT TTCTAGGCCA TATAAGGTAG GAGACAGAGT GACGGTATCA ACGTGGCAAT ATGGTTTATT AGCTCCAACC TATCCTCCAA AGTTCTTCTC TAATGATTTT TTGATCCCAG GTTACACCGG TACAGTAACA GACATTTCAT TACTTTATAC TACAATATTT ACAGACGACC AGATTCCAGT AAAGATACCT AATAGTATAA TGATTCAAGC TGCAATTTTC ATTCATAATG GGGAGGAGAA AAGGAAGGTC AGAACTAAGT ATGAAGTCTC CAAGGATATA GATCCAGATG TTTTAATTAA CGTTCTTAAG GAAAAAATAA AGAAACTGGA TTTCGTAATC GAAGAACCTT CAATTAAAGT GCTTGAAACT ACATTAAACA CATACATTTT AGGAATAGAT ACGATCTGTA AAACTATATA TGAAGAACCT CCAAGAAGCG AAATACTAAA AATAGTTATG AGGACAGTAA GAGAACTTCA AACTAAGACC GCAGCTGCCA GTGACTATAA TAGATAA
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Protein sequence | MALNERRVIA LILTVVLAGI ALGGGVFVLS SVFKIIPADY LLYIYAAIWF IVAVIVSYFI GSLIRNRLGD VIGYDNASSI SFVVRLIGYI IAFVGFFVLI RVSLGTALAA GGFAGLVLGL AAQDVLANIF GGIMIVISRP YKVGDRVTVS TWQYGLLAPT YPPKFFSNDF LIPGYTGTVT DISLLYTTIF TDDQIPVKIP NSIMIQAAIF IHNGEEKRKV RTKYEVSKDI DPDVLINVLK EKIKKLDFVI EEPSIKVLET TLNTYILGID TICKTIYEEP PRSEILKIVM RTVRELQTKT AAASDYNR
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