Gene Ssol_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0583 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp531341 
End bp532267 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content36% 
IMG OID 
ProductMscS Mechanosensitive ion channel 
Protein accessionACX90859 
Protein GI261601256 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.330876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTAA ACGAAAGAAG AGTAATAGCA CTCATCTTAA CTGTAGTATT AGCTGGAATA 
GCACTCGGCG GTGGTGTTTT CGTACTATCC AGCGTATTTA AGATAATACC TGCTGATTAT
CTACTCTATA TTTACGCTGC AATTTGGTTT ATAGTTGCGG TTATTGTTTC GTACTTTATA
GGCTCTCTTA TTAGGAATAG ATTAGGAGAT GTAATAGGTT ACGATAACGC TAGCAGTATT
TCATTTGTAG TTAGACTAAT TGGATATATC ATAGCATTCG TAGGATTCTT TGTACTAATT
AGGGTAAGTT TGGGTACTGC GTTAGCTGCT GGTGGTTTCG CGGGATTAGT GTTAGGTTTA
GCTGCCCAAG ACGTTCTTGC CAACATATTC GGCGGGATAA TGATAGTGAT TTCTAGGCCA
TATAAGGTAG GAGACAGAGT GACGGTATCA ACGTGGCAAT ATGGTTTATT AGCTCCAACC
TATCCTCCAA AGTTCTTCTC TAATGATTTT TTGATCCCAG GTTACACCGG TACAGTAACA
GACATTTCAT TACTTTATAC TACAATATTT ACAGACGACC AGATTCCAGT AAAGATACCT
AATAGTATAA TGATTCAAGC TGCAATTTTC ATTCATAATG GGGAGGAGAA AAGGAAGGTC
AGAACTAAGT ATGAAGTCTC CAAGGATATA GATCCAGATG TTTTAATTAA CGTTCTTAAG
GAAAAAATAA AGAAACTGGA TTTCGTAATC GAAGAACCTT CAATTAAAGT GCTTGAAACT
ACATTAAACA CATACATTTT AGGAATAGAT ACGATCTGTA AAACTATATA TGAAGAACCT
CCAAGAAGCG AAATACTAAA AATAGTTATG AGGACAGTAA GAGAACTTCA AACTAAGACC
GCAGCTGCCA GTGACTATAA TAGATAA
 
Protein sequence
MALNERRVIA LILTVVLAGI ALGGGVFVLS SVFKIIPADY LLYIYAAIWF IVAVIVSYFI 
GSLIRNRLGD VIGYDNASSI SFVVRLIGYI IAFVGFFVLI RVSLGTALAA GGFAGLVLGL
AAQDVLANIF GGIMIVISRP YKVGDRVTVS TWQYGLLAPT YPPKFFSNDF LIPGYTGTVT
DISLLYTTIF TDDQIPVKIP NSIMIQAAIF IHNGEEKRKV RTKYEVSKDI DPDVLINVLK
EKIKKLDFVI EEPSIKVLET TLNTYILGID TICKTIYEEP PRSEILKIVM RTVRELQTKT
AAASDYNR