Gene Ssol_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_0428 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp384659 
End bp385690 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content38% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionACX90711 
Protein GI261601108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATAA ATATAGTTTT CTTTATCATA AGAAGAATCA TTAATGCTTT CATTACCCTA 
ATATTACTAA TTATATTGGT TTTTATTATG ATACATATAA TAGCACCAAA TCCCTTAGCC
TTAGCAAGGC TATACACTGG GCCACATGCG ACCTACACAG AGTTAGAACA GGTAGCCAAA
CAATATGGAC TTGACCAACC CCTTTACATC CAAATAATTA ACTACATAAT TAATGTACTA
CATGGAAATT TCGGTATAGA TCCAACATAT AAGGTACCGG TGATTACGCT GATTGGAAAA
TATTTACCAA GAACCCTAGA GTTGGTAATA CCAGCAACAA TACTTTCCGT AGTTATTGGT
TTGTTTACTG GCGCCATAGC TGCATCAAAC AGAAATAAAC CGCTGGATTA TCTGGTCCGT
GGCGTTTACT TAGTTACTTG GGCATCTCCG CCATTTTTAA TTGCTGTTAT ATTACAGCTA
GTTATAGCAT ACTATCTCAG ATTATTACCC CCTACCGGTA CTGTCAACCC AGTTCTTACT
CCGCCAAAGT CTATAACACC TTTTCCTTTG CTTAACGCGA TGTTAGCAGG GGATTGGCCT
TATTTTTCTA GTTTAGTCCA CCATATGGTC TTGCCTGTTA TAGCGATTGC GTTGGTCAGT
TTTGGAATAG TGACTAGAAT AGCCAGAGCT TCAATGCTGG ATTATATGGA ATCTGACTTC
GCTAAACTTA GTCTCATGAA GGGGCTTAGT AGAAGAAGAG TTGTATATGG TGTGGTTTTA
AGAAATGCAT CGATACCATT AGTAACATTG ATTGCTTTGC TTTTCGGATA CTCAGTAGCT
GGGGCAGTCG TGATTGAGGA TATATTCCAA TATCATGGAA TGGGGTATTT CATTACTCAA
GCAATAGAAA GTCTAGATTA CACATCAATT TTGGGGACAA CAATAATTGT TGGAATTGCA
ATAATAATAG CGAATCTTAT AGCAGATATA CTTTACGGGG TTCTAGATCC AAGGGTGAGG
ATAGTTGAGT GA
 
Protein sequence
MSINIVFFII RRIINAFITL ILLIILVFIM IHIIAPNPLA LARLYTGPHA TYTELEQVAK 
QYGLDQPLYI QIINYIINVL HGNFGIDPTY KVPVITLIGK YLPRTLELVI PATILSVVIG
LFTGAIAASN RNKPLDYLVR GVYLVTWASP PFLIAVILQL VIAYYLRLLP PTGTVNPVLT
PPKSITPFPL LNAMLAGDWP YFSSLVHHMV LPVIAIALVS FGIVTRIARA SMLDYMESDF
AKLSLMKGLS RRRVVYGVVL RNASIPLVTL IALLFGYSVA GAVVIEDIFQ YHGMGYFITQ
AIESLDYTSI LGTTIIVGIA IIIANLIADI LYGVLDPRVR IVE