| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3983 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 4297391 |
|---|
| End bp | 4298992 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | malate synthase A |
|---|
| Protein accession | ACX41583 |
|---|
| Protein GI | 260451161 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAC AGGCAACAAC AACCGATGAA CTGGCTTTCA CAAGGCCGTA TGGCGAGCAG
GAGAAGCAAA TTCTTACTGC CGAAGCGGTA GAATTTCTGA CTGAGCTGGT GACGCATTTT
ACGCCACAAC GCAATAAACT TCTGGCAGCG CGCATTCAGC AGCAGCAAGA TATTGATAAC
GGAACGTTGC CTGATTTTAT TTCGGAAACA GCTTCCATTC GCGATGCTGA TTGGAAAATT
CGCGGGATTC CTGCGGACTT AGAAGACCGC CGCGTAGAGA TAACTGGCCC GGTAGAGCGC
AAGATGGTGA TCAACGCGCT CAACGCCAAT GTGAAAGTCT TTATGGCCGA TTTCGAAGAT
TCACTGGCAC CAGACTGGAA CAAAGTGATC GACGGGCAAA TTAACCTGCG TGATGCGGTT
AACGGCACCA TCAGTTACAC CAATGAAGCA GGCAAAATTT ACCAGCTCAA GCCCAATCCA
GCGGTTTTGA TTTGTCGGGT ACGCGGTCTG CACTTGCCGG AAAAACATGT CACCTGGCGT
GGTGAGGCAA TCCCCGGCAG CCTGTTTGAT TTTGCGCTCT ATTTCTTCCA CAACTATCAG
GCACTGTTGG CAAAGGGCAG TGGTCCCTAT TTCTATCTGC CGAAAACCCA GTCCTGGCAG
GAAGCGGCCT GGTGGAGCGA AGTCTTCAGC TATGCAGAAG ATCGCTTTAA TCTGCCGCGC
GGCACCATCA AGGCGACGTT GCTGATTGAA ACGCTGCCCG CCGTGTTCCA GATGGATGAA
ATCCTTCACG CGCTGCGTGA CCATATTGTT GGTCTGAACT GCGGTCGTTG GGATTACATC
TTCAGCTATA TCAAAACGTT GAAAAACTAT CCCGATCGCG TCCTGCCAGA CAGACAGGCA
GTGACGATGG ATAAACCATT CCTGAATGCT TACTCACGCC TGTTGATTAA AACCTGCCAT
AAACGCGGTG CTTTTGCGAT GGGCGGCATG GCGGCGTTTA TTCCGAGCAA AGATGAAGAG
CACAATAACC AGGTGCTCAA CAAAGTAAAA GCGGATAAAT CGCTGGAAGC CAATAACGGT
CACGATGGCA CATGGATCGC TCACCCAGGC CTTGCGGACA CGGCAATGGC GGTATTCAAC
GACATTCTCG GCTCCCGTAA AAATCAGCTT GAAGTGATGC GCGAACAAGA CGCGCCGATT
ACTGCCGATC AGCTGCTGGC ACCTTGTGAT GGTGAACGCA CCGAAGAAGG TATGCGCGCC
AACATTCGCG TGGCTGTGCA GTACATCGAA GCGTGGATCT CTGGCAACGG CTGTGTGCCG
ATTTATGGCC TGATGGAAGA TGCGGCGACG GCTGAAATTT CCCGTACCTC GATCTGGCAG
TGGATCCATC ATCAAAAAAC GTTGAGCAAT GGCAAACCGG TGACCAAAGC CTTGTTCCGC
CAGATGCTGG GCGAAGAGAT GAAAGTCATT GCCAGCGAAC TGGGCGAAGA ACGTTTCTCC
CAGGGGCGTT TTGACGATGC CGCACGCTTG ATGGAACAGA TCACCACTTC CGATGAGTTA
ATTGATTTCC TGACCCTGCC AGGCTACCGC CTGTTAGCGT AA
|
|---|
| Protein sequence | MTEQATTTDE LAFTRPYGEQ EKQILTAEAV EFLTELVTHF TPQRNKLLAA RIQQQQDIDN
GTLPDFISET ASIRDADWKI RGIPADLEDR RVEITGPVER KMVINALNAN VKVFMADFED
SLAPDWNKVI DGQINLRDAV NGTISYTNEA GKIYQLKPNP AVLICRVRGL HLPEKHVTWR
GEAIPGSLFD FALYFFHNYQ ALLAKGSGPY FYLPKTQSWQ EAAWWSEVFS YAEDRFNLPR
GTIKATLLIE TLPAVFQMDE ILHALRDHIV GLNCGRWDYI FSYIKTLKNY PDRVLPDRQA
VTMDKPFLNA YSRLLIKTCH KRGAFAMGGM AAFIPSKDEE HNNQVLNKVK ADKSLEANNG
HDGTWIAHPG LADTAMAVFN DILGSRKNQL EVMREQDAPI TADQLLAPCD GERTEEGMRA
NIRVAVQYIE AWISGNGCVP IYGLMEDAAT AEISRTSIWQ WIHHQKTLSN GKPVTKALFR
QMLGEEMKVI ASELGEERFS QGRFDDAARL MEQITTSDEL IDFLTLPGYR LLA
|
|---|
| |