Gene EcDH1_3840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3840 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4135637 
End bp4136770 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content50% 
IMG OID 
ProductBeta-lactamase 
Protein accessionACX41442 
Protein GI260451020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAAA CGACGCTCTG CGCCTTATTA ATTACCGCCT CTTGCTCCAC ATTTGCTGCC 
CCTCAACAAA TCAACGATAT TGTGCATCGC ACAATTACCC CGCTTATAGA GCAACAAAAG
ATCCCGGGTA TGGCGGTGGC GGTAATTTAT CAGGGTAAAC CTTATTACTT TACCTGGGGC
TATGCGGACA TCGCCAAAAA GCAGCCCGTC ACACAGCAAA CGTTGTTTGA GTTAGGTTCG
GTCAGCAAAA CATTTACTGG CGTGCTTGGT GGCGACGCTA TTGCTCGAGG GGAAATCAAG
TTAAGCGATC CCACAACAAA ATACTGGCCT GAACTTACCG CTAAACAGTG GAATGGGATC
ACACTATTAC ATCTCGCAAC CTACACTGCT GGCGGCCTGC CATTGCAGGT GCCGGATGAG
GTGAAATCCT CAAGCGACTT GCTGCGCTTC TATCAAAACT GGCAGCCTGC ATGGGCTCCA
GGAACACAAC GTCTGTATGC CAACTCCAGT ATCGGTTTGT TCGGCGCACT GGCTGTGAAG
CCGTCTGGTT TGAGTTTTGA GCAGGCGATG CAAACTCGTG TCTTCCAGCC ACTCAAACTC
AACCATACGT GGATTAATGT ACCGCCCGCA GAAGAAAAGA ATTACGCCTG GGGATATCGC
GAAGGTAAGG CAGTGCATGT TTCGCCTGGG GCGTTAGATG CTGAAGCTTA TGGTGTGAAG
TCGACCATTG AAGATATGGC CCGCTGGGTG CAAAGCAATT TAAAACCCCT TGATATCAAT
GAGAAAACGC TTCAACAAGG GATACAACTG GCACAATCTC GCTACTGGCA AACCGGCGAT
ATGTATCAGG GCCTGGGCTG GGAAATGCTG GACTGGCCGG TAAATCCTGA CAGCATCATT
AACGGCAGTG ACAATAAAAT TGCACTGGCA GCACGCCCCG TAAAAGCGAT TACGCCCCCA
ACTCCTGCAG TACGCGCATC ATGGGTACAT AAAACAGGGG CGACCGGCGG ATTTGGTAGC
TATGTCGCGT TTATTCCAGA AAAAGAGCTG GGTATCGTGA TGCTGGCAAA CAAAAACTAT
CCCAATCCAG CGAGAGTCGA CGCCGCCTGG CAGATTCTTA ACGCTCTACA GTAA
 
Protein sequence
MFKTTLCALL ITASCSTFAA PQQINDIVHR TITPLIEQQK IPGMAVAVIY QGKPYYFTWG 
YADIAKKQPV TQQTLFELGS VSKTFTGVLG GDAIARGEIK LSDPTTKYWP ELTAKQWNGI
TLLHLATYTA GGLPLQVPDE VKSSSDLLRF YQNWQPAWAP GTQRLYANSS IGLFGALAVK
PSGLSFEQAM QTRVFQPLKL NHTWINVPPA EEKNYAWGYR EGKAVHVSPG ALDAEAYGVK
STIEDMARWV QSNLKPLDIN EKTLQQGIQL AQSRYWQTGD MYQGLGWEML DWPVNPDSII
NGSDNKIALA ARPVKAITPP TPAVRASWVH KTGATGGFGS YVAFIPEKEL GIVMLANKNY
PNPARVDAAW QILNALQ