| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3641 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 3918307 |
|---|
| End bp | 3919668 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | ACX41254 |
|---|
| Protein GI | 260450832 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAAAG AAAATATCAC CATCGATCCG CGTTCTTCAT TTACTCCATC TTCGTCGGCA
GATATTCCCG TGCCACCAGA TGGATTAGTT CAACGCAGTA CCCGAATTAA ACGCATTCAA
ACCACCGCCA TGTTGTTATT ATTTTTTGCG GCGGTAATCA ATTATCTCGA CCGCAGTTCG
CTGTCGGTAG CAAATTTAAC GATTCGTGAA GAATTGGGAT TAAGTGCCAC CGAAATCGGC
GCTTTGCTCT CCGTGTTTTC ACTCGCTTAC GGGATTGCGC AACTTCCTTG CGGCCCACTA
TTGGATCGTA AAGGCCCACG CCTGATGCTG GGACTGGGGA TGTTCTTCTG GTCACTGTTC
CAGGCAATGT CTGGCATGGT GCACAACTTT ACGCAGTTCG TGTTGGTGCG TATCGGTATG
GGGATTGGTG AAGCGCCGAT GAACCCATGC GGTGTAAAAG TCATTAACGA CTGGTTCAAC
ATCAAAGAGC GCGGACGCCC GATGGGCTTC TTCAACGCAG CTTCTACCAT TGGCGTTGCC
GTAAGCCCAC CGATTCTGGC GGCGATGATG CTGGTGATGG GCTGGCGCGG GATGTTTATT
ACCATTGGTG TACTGGGGAT TTTTCTCGCC ATCGGCTGGT ATATGCTCTA TCGCAACCGC
GAGCACGTAG AACTGACTGC CGTTGAGCAA GCTTATCTCA ATGCAGGTAG CGTCAATGCC
CGCCGAGATC CGCTCAGTTT TGCCGAATGG CGCAGCCTGT TCCGTAACCG TACAATGTGG
GGAATGATGC TCGGATTCAG TGGCATCAAC TACACTGCGT GGCTGTATCT GGCCTGGCTT
CCTGGTTACC TGCAAACAGC CTATAACCTG GATTTAAAAA GCACAGGGTT GATGGCGGCT
ATCCCTTTCC TGTTTGGGGC TGCCGGGATG CTGGTCAACG GTTACGTTAC CGACTGGCTG
GTCAAAGGGG GAATGGCTCC GATTAAAAGC CGTAAGATCT GCATTATTGC CGGGATGTTC
TGTTCTGCCG CCTTTACGCT GATAGTACCA CAAGCGACAA CATCCATGAC GGCGGTTCTG
CTGATTGGCA TGGCACTGTT CTGTATTCAC TTTGCCGGAA CATCCTGCTG GGGCTTGATC
CACGTCGCAG TTGCTTCTCG CATGACTGCG TCGGTGGGCA GTATCCAGAA CTTTGCCAGC
TTCATCTGCG CCTCTTTTGC GCCGATCATT ACTGGTTTTA TTGTTGATAC CACCCACTCA
TTCCGTCTGG CACTAATCAT CTGCGGTTGC GTCACCGCAG CGGGGGCACT GGCGTACATC
TTCCTGGTTC GTCAGCCGAT CAACGACCCA CGTAAAGATT AA
|
|---|
| Protein sequence | MEKENITIDP RSSFTPSSSA DIPVPPDGLV QRSTRIKRIQ TTAMLLLFFA AVINYLDRSS
LSVANLTIRE ELGLSATEIG ALLSVFSLAY GIAQLPCGPL LDRKGPRLML GLGMFFWSLF
QAMSGMVHNF TQFVLVRIGM GIGEAPMNPC GVKVINDWFN IKERGRPMGF FNAASTIGVA
VSPPILAAMM LVMGWRGMFI TIGVLGIFLA IGWYMLYRNR EHVELTAVEQ AYLNAGSVNA
RRDPLSFAEW RSLFRNRTMW GMMLGFSGIN YTAWLYLAWL PGYLQTAYNL DLKSTGLMAA
IPFLFGAAGM LVNGYVTDWL VKGGMAPIKS RKICIIAGMF CSAAFTLIVP QATTSMTAVL
LIGMALFCIH FAGTSCWGLI HVAVASRMTA SVGSIQNFAS FICASFAPII TGFIVDTTHS
FRLALIICGC VTAAGALAYI FLVRQPINDP RKD
|
|---|
| |