Gene EcDH1_3461 details

Gene Information

• Locus tag: EcDH1_3461
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 3714494
• End bp: 3715078
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 45%
• Product: Fimbrial protein
• Protein accession: ACX41076
• Protein GI: 260450654

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.00000984412
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTAAAA AATTAGGTTT TGCCCTGTCT GGTCTTATGC TGGCGATGGT TGCAGGTACT 
GCTTCTGCTG ATATGGACGG CGGTCAGTTA AATATCAGTG GTCTGGTTGT TGATAACACC 
TGTGAAACCC GCGTTGACGG CGGTAACAAG GATGGTCTGA TCCTGCTGCA AACCGCAACC 
GTTGGTGAAA TCGATGCTGG CGTACTGAAT GACACCGTTG GCGCTAAAGC TAAACCTTTC 
AGCATCACCG TTGACTGCAG CAAAGCAAAT CCGAATCCAG GTAGCACGGC TAAAATGACC 
TTCGGTTCTG TTTTCTTTGG TAACAGCAAA GGGACTTTGA ACAACGACAT GTCTATTAAC 
AACCCATCTG ACGGCGTTAA TATCGCTCTA CACAATATTG ATGGTTCCAC TATCAAACAG 
GTTCAAATTA ACAACCCTGG CGATGTGTAT ACTAAAGCCC TGGATGCAAC GACAAAATCT 
GCTGTTTATG ATTTTAAAGC GTCTTACGTT CGTGCCGTCG CAGACCAAAC AGCAACTGCT 
GGTTATGTAA AAACTAACAC TGCATACACC ATTACTTATC AGTAA 

 

Protein sequence

MSKKLGFALS GLMLAMVAGT ASADMDGGQL NISGLVVDNT CETRVDGGNK DGLILLQTAT 
VGEIDAGVLN DTVGAKAKPF SITVDCSKAN PNPGSTAKMT FGSVFFGNSK GTLNNDMSIN 
NPSDGVNIAL HNIDGSTIKQ VQINNPGDVY TKALDATTKS AVYDFKASYV RAVADQTATA 
GYVKTNTAYT ITYQ