Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_3113 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 3343414 |
End bp | 3347694 |
Gene Length | 4281 bp |
Protein Length | 1426 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | YD repeat protein |
Protein accession | ACX40739 |
Protein GI | 260450317 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.637043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGAA AACCAGCGGC GCGTCAGGGA GATATGACTC AGTATGGCGG TCCCATTGTC CAGGGTTCGG CAGGTGTAAG AATTGGCGCG CCCACCGGCG TGGCGTGCTC GGTGTGTCCG GGCGGGATGA CTTCGGGCAA CCCGGTAAAT CCGCTGCTGG GGGCGAAGGT GCTGCCCGGC GAGACGGACC TTGCGCTGCC CGGCCCGCTG CCGTTCATTC TCTCCCGCAC CTACAGCAGC TACCGGACGA AGACGCCTGC ACCGGTGGGC GTTTTCGGCC CCGGCTGGAA AGCGCCTTCT GATATCCGCT TACAGCTACG TGATGACGGA CTGATACTCA ACGACAACGG CGGGCGGAGC ATTCACTTTG AGCCGCTGCT GCCGGGGGAG GCGGTGTACA GCCGCAGTGA GTCAATGTGG CTGGTGCGCG GTGGTAAGGC AGCACAGCCG GACGGCCATA CGCTGGCGCG GCTGTGGGGG GCGCTGCCGC CGGATATCCG GTTAAGCCCG CATCTTTACC TGGCGACCAA CAGCGCACAG GGGCCGTGGT GGATACTGGG GTGGTCTGAG CGGGTGCCGG GTGCTGAGGA CGTACTGCCA GCGCCGCTGC CGCCGTACCG GGTGCTTACC GGGATGGCGG ACCGCTTCGG GCGGACGCTG ACGTACCGGC GTGAGGCCGC CGGTGACCTG GCCGGGGAAA TCACCGGCGT GACGGACGGT GCCGGGCGGG AGTTCCGTCT GGTGCTGACC ACGCAGGCGC AGCGTGCGGA AGAGGCCCGC ACCTCTTCGC TATCTTCTTC TGACAGTTCC CGCCCTCTCT CAGCCTCAGC GTTCCCCGAC ACACTGCCCG GTACCGAATA CGGCCCCGAC AGGGGTATCC GCCTTTCGGC GGTGTGGCTG ATGCACGACC CGGCATACCC GGAGAGCCTG CCCGCTGCGC CACTGGTGCG GTACACGTAT ACGGAAGCCG GTGAACTGCT GGCGGTATAT GACCGCAGCA ATACGCAGGT GCGCGCTTTC ACGTATGACG CGCAGCACCC GGGCCGGATG GTGGCGCACC GTTACGCGGG AAGGCCGGAG ATGCGCTACC GCTACGACGA TACGGGGCGG GTGGTGGAGC AACTGAACCC GGCAGGGTTA AGCTACCGCT ATCTTTATGA GCAGGACCGC ATCACCGTCA CCGACAGCCT GAACCGGCGT GAGGTGCTGC ATACAGAAGG CGGGGCCGGG CTGAAACGGG TGGTGAAAAA AGAACTGGCG GACGGCAGCG TCACGCGCAG CGGGTATGAC GCGGCAGGAA GGCTCACGGC GCAGACGGAC GCGGCGGGAC GGAGGACAGA GTACGGTCTG AATGTGGTGT CCGGCGATAT CACGGACATC ACCACACCGG ACGGGCGGGA GACGAAATTT TACTATAACG ACGGGAACCA GCTGACGGCG GTGGTGTCCC CGGACGGGCT GGAGAGCCGC CGGGAATATG ATGAACCGGG CAGGCTGGTA TCGGAGACAT CGCGCAGCGG GGAGACAGTA CGCTACCGCT ACGATGACGC GCACAGTGAG TTACCGGCGA CGACAACGGA TGCGACGGGC AGCACCCGGC AGATGACCTG GAGCCGCTAC GGGCAGTTGC TGGCGTTCAC CGACTGCTCG GGCTACCAGA CCCGTTATGA ATACGACCGC TTCGGCCAGA TGACGGCGGT CCACCGCGAG GAAGGCATCA GCCTTTACCG CCGCTATGAC AACCGTGGCC GGTTAACCTC GGTGAAAGAC GCACAGGGCC GTGAAACGCG GTATGAATAC AACGCCGCAG GCGACCTGAC TGCCGTTATC ACCCCGGACG GCAACCGGAG CGAGACACAG TACGATGCGT GGGGAAAGGC GGTCAGCACC ACGCAGGGCG GGCTGACGCG CAGTATGGAG TACGATGCTG CCGGACGTGT CATCAGCCTG ACCAACGAGA ACGGCAGCCA CAGCGTCTTC AGTTACGATG CGCTGGACCG GCTGGTACAG CAGGGCGGCT TTGACGGGCG GACGCAACGT TATCATTATG ACCTGACCGG AAAACTCACA CAGAGTGAGG ATGAGGGACT TGTCATCCTC TGGTACTACG ATGAATCGGA CCGTATCACT CACCGCACGG TGAACGGCGA ACCGGCAGAG CAGTGGCAGT ATGATGGCCA CGGCTGGCTG ACAGACATCA GCCACCTGAG CGAAGGCCAC CGTGTTGCCG TCCACTATGG CTATGACGAT AAAGGCCGCC TGACCGGCGA ATGCCAGACG GTGGAGAACC CGGAGACGGG GGAACTGCTG TGGCAGCATG AGACGAAACA CGCATACAAC GAGCAGGGGC TGGCAAACCG CGTCACGCCG GACAGCCTGC CGCCGGTGGA GTGGCTGACG TATGGCAGCG GTTACCTGGC GGGAATGAAG CTGGGCGGGA CGCCGCTGGT CGAGTATACG CGGGACAGGC TGCACCGTGA GACGGTGCGC AGCTTCGGCA GCATGGCAGG CAGTAATGCC GCATACGAAC TGACCAGCAC ATACACCCCC GCAGGCCAGT TACAGAGCCA GCACCTGAAC AGCCTGGTAT ATGACCGTGA CTACGGGTGG AGTGACAACG GCGACCTGGT GCGCATCAGC GGCCCGCGAC AGACGCGGGA ATACGGCTAC AGCGCCACGG GCAGGCTGGA GAGTGTGCGC ACCCTCGCAC CAGACCTGGA CATCCGCATC CCGTATGCCA CGGACCCGGC GGGCAACCGG CTGCCGGACC CGGAGCTGCA CCCGGACAGT ACACTCACAG TGTGGCCGGA TAACCGCATC GCGGAGGATG CGCACTATGT CTACCGCCAC GATGAATACG GCAGGCTGAC GGAGAAGACG GACCGCATCC CGGCGGGTGT GATACGGACG GACGACGAGC GGACCCACCA CTACCACTAC GACAGCCAGC ACCGCCTGGT GTTCTACACG CGGATACAGC ATGGCGAGCC ACTGGTCGAG AGCCGCTACC TCTACGACCC GCTGGGACGG CGAATGGCAA AACGGGTCTG GCGGCGGGAG CGTGACCTGA CGGGGTGGAT GTCGCTGTCG CGTAAACCGG AGGTGACGTG GTATGGCTGG GACGGAGACA GGCTGACGAC GGTGCAGACT GACACCACAC GTATCCAGAC GGTATACGAG CCGGGAAGCT TCACGCCGCT CATCCGGGTC GAGACAGAGA ACGGCGAGCG GGAAAAAGCG CAGCGGCGCA GCCTGGCAGA GACGCTCCAG CAGGAAGGGA GTGAGAACGG CCACGGCGTG GTGTTCCCGG CTGAACTGGT GCGGCTGCTG GACAGGCTGG AGGAAGAAAT CCGGGCAGAC CGCGTGAGCA GTGAAAGCCG GGCGTGGCTT GCGCAGTGCG GGCTGACGGT GGAGCAACTG GCCAGACAGG TGGAGCCGGA ATACACACCG GCGCGAAAAG CTCATCTTTA TCACTGCGAC CACCGGGGAC TGCCGCTGGC GCTTATCAGC GAAGACGGCA ATACGGCGTG GAGCGCGGAA TATGATGAAT GGGGCAACCA GCTTAATGAG GAGAACCCGC ATCATGTGTA TCAGCCGTAC CGTCTGCCAG GGCAGCAGCA TGATGAGGAA TCAGGGCTGT ACTATAACCG TCACCGGTAC TACGATCCGT TGCAGGGGCG GTATATTACT CAGGACCCGA TGGGGTTGAA AGGGGGATGG AATTTATATC AGTATCCTTT AAATCCACTA CAACAAATTG ACCCTATGGG ATTATTGCAG ACTTGGGATG ATGCCAGATC TGGAGCATGT ACGGGGGGAG TTTGTGGTGT TCTTTCACGT ATAATAGGAC CAAGTAAATT TGATAGTACT GCAGATGCTG CGTTAGATGC TTTGAAAGAA ACGCAGAATA GATCTCTATG TAATGATATG GAATACTCTG GTATTGTCTG TAAAGATACT AATGGAAAAT ATTTTGCATC TAAGGCAGAA ACTGATAATT TAAGAAAGGA GTCATATCCT CTGAAAAGAA AATGTCCCAC AGGTACAGAT AGAGTTGCTG CTTATCATAC TCACGGTGCA GATAGTCATG GCGATTATGT TGATGAATTT TTTTCAAGTA GCGATAAAAA TCTTGTAAGA AGTAAAGATA ATAATCTTGA AGCATTTTAT CTCGCAACAC CTGATGGACG ATTTGAGGCG CTTAATAATA AAGGAGAATA TATTTTTATC AGAAATAGTG TCCCGGGATT GAGTTCAGTA TGCATACCGT ATCATGATTA A
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Protein sequence | MSGKPAARQG DMTQYGGPIV QGSAGVRIGA PTGVACSVCP GGMTSGNPVN PLLGAKVLPG ETDLALPGPL PFILSRTYSS YRTKTPAPVG VFGPGWKAPS DIRLQLRDDG LILNDNGGRS IHFEPLLPGE AVYSRSESMW LVRGGKAAQP DGHTLARLWG ALPPDIRLSP HLYLATNSAQ GPWWILGWSE RVPGAEDVLP APLPPYRVLT GMADRFGRTL TYRREAAGDL AGEITGVTDG AGREFRLVLT TQAQRAEEAR TSSLSSSDSS RPLSASAFPD TLPGTEYGPD RGIRLSAVWL MHDPAYPESL PAAPLVRYTY TEAGELLAVY DRSNTQVRAF TYDAQHPGRM VAHRYAGRPE MRYRYDDTGR VVEQLNPAGL SYRYLYEQDR ITVTDSLNRR EVLHTEGGAG LKRVVKKELA DGSVTRSGYD AAGRLTAQTD AAGRRTEYGL NVVSGDITDI TTPDGRETKF YYNDGNQLTA VVSPDGLESR REYDEPGRLV SETSRSGETV RYRYDDAHSE LPATTTDATG STRQMTWSRY GQLLAFTDCS GYQTRYEYDR FGQMTAVHRE EGISLYRRYD NRGRLTSVKD AQGRETRYEY NAAGDLTAVI TPDGNRSETQ YDAWGKAVST TQGGLTRSME YDAAGRVISL TNENGSHSVF SYDALDRLVQ QGGFDGRTQR YHYDLTGKLT QSEDEGLVIL WYYDESDRIT HRTVNGEPAE QWQYDGHGWL TDISHLSEGH RVAVHYGYDD KGRLTGECQT VENPETGELL WQHETKHAYN EQGLANRVTP DSLPPVEWLT YGSGYLAGMK LGGTPLVEYT RDRLHRETVR SFGSMAGSNA AYELTSTYTP AGQLQSQHLN SLVYDRDYGW SDNGDLVRIS GPRQTREYGY SATGRLESVR TLAPDLDIRI PYATDPAGNR LPDPELHPDS TLTVWPDNRI AEDAHYVYRH DEYGRLTEKT DRIPAGVIRT DDERTHHYHY DSQHRLVFYT RIQHGEPLVE SRYLYDPLGR RMAKRVWRRE RDLTGWMSLS RKPEVTWYGW DGDRLTTVQT DTTRIQTVYE PGSFTPLIRV ETENGEREKA QRRSLAETLQ QEGSENGHGV VFPAELVRLL DRLEEEIRAD RVSSESRAWL AQCGLTVEQL ARQVEPEYTP ARKAHLYHCD HRGLPLALIS EDGNTAWSAE YDEWGNQLNE ENPHHVYQPY RLPGQQHDEE SGLYYNRHRY YDPLQGRYIT QDPMGLKGGW NLYQYPLNPL QQIDPMGLLQ TWDDARSGAC TGGVCGVLSR IIGPSKFDST ADAALDALKE TQNRSLCNDM EYSGIVCKDT NGKYFASKAE TDNLRKESYP LKRKCPTGTD RVAAYHTHGA DSHGDYVDEF FSSSDKNLVR SKDNNLEAFY LATPDGRFEA LNNKGEYIFI RNSVPGLSSV CIPYHD
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