Gene EcDH1_3079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3079 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3307110 
End bp3307625 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content50% 
IMG OID 
ProductFimbrial protein 
Protein accessionACX40705 
Protein GI260450283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGAG TACTCTTTAG CTGTTTCTGC GGGCTACTGT GGAGTTCCAG TGGATGGGCA 
GTTGACCCTT TAGGAACGAT TAATATCAAT TTGCACGGTA ACGTTGTTGA TTTCTCCTGT
ACCGTAAACA CAGCGGATAT TGATAAGACG GTAGATTTAG GCAGATGGCC TACGACACAA
CTACTGAACG CTGGCGATAC CACGGCACTC GTCCCTTTTA GCCTGCGGCT GGAGGGATGT
CCTCCGGGTT CAGTTGCGAT TTTATTTACG GGAACGCCGG CATCCGATAC CAACCTGCTG
GCTCTGGATG ATCCCGCAAT GGCACAAACC GTCGCCATCG AATTACGTAA TAGCGATCGC
TCCCGGCTCG CACTGGGGGA GGCGAGCCCG ACTGAGGAAG TAGATGCAAA TGGCAATGTC
ACACTAAACT TTTTTGCCAA TTATCGAGCG TTAGCCAGCG GTGTTCGGCC AGGTGTGGCG
AAAGCGGATG CGATATTTAT GATCAATTAT AATTAA
 
Protein sequence
MRRVLFSCFC GLLWSSSGWA VDPLGTININ LHGNVVDFSC TVNTADIDKT VDLGRWPTTQ 
LLNAGDTTAL VPFSLRLEGC PPGSVAILFT GTPASDTNLL ALDDPAMAQT VAIELRNSDR
SRLALGEASP TEEVDANGNV TLNFFANYRA LASGVRPGVA KADAIFMINY N