Gene EcDH1_2986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2986 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3209514 
End bp3210545 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content52% 
IMG OID 
ProductDNA polymerase III, delta subunit 
Protein accessionACX40615 
Protein GI260450193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000013021 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGGT TGTACCCGGA ACAACTCCGC GCGCAGCTCA ATGAAGGGCT GCGCGCGGCG 
TATCTTTTAC TTGGTAACGA TCCTCTGTTA TTGCAGGAAA GCCAGGACGC TGTTCGTCAG
GTAGCTGCGG CACAAGGATT CGAAGAACAC CACACTTTTT CCATTGATCC CAACACTGAC
TGGAATGCGA TCTTTTCGTT ATGCCAGGCT ATGAGTCTGT TTGCCAGTCG ACAAACGCTA
TTGCTGTTGT TACCAGAAAA CGGACCGAAT GCGGCGATCA ATGAGCAACT TCTCACACTC
ACCGGACTTC TGCATGACGA CCTGCTGTTG ATCGTCCGCG GTAATAAATT AAGCAAAGCG
CAAGAAAATG CCGCCTGGTT TACTGCGCTT GCGAATCGCA GCGTGCAGGT GACCTGTCAG
ACACCGGAGC AGGCTCAGCT TCCCCGCTGG GTTGCTGCGC GCGCAAAACA GCTCAACTTA
GAACTGGATG ACGCGGCAAA TCAGGTGCTC TGCTACTGTT ATGAAGGTAA CCTGCTGGCG
CTGGCTCAGG CACTGGAGCG TTTATCGCTG CTCTGGCCAG ACGGCAAATT GACATTACCG
CGCGTTGAAC AGGCGGTGAA TGATGCCGCG CATTTCACCC CTTTTCATTG GGTTGATGCT
TTGTTGATGG GAAAAAGTAA GCGCGCATTG CATATTCTTC AGCAACTGCG TCTGGAAGGC
AGCGAACCGG TTATTTTGTT GCGCACATTA CAACGTGAAC TGTTGTTACT GGTTAACCTG
AAACGCCAGT CTGCCCATAC GCCACTGCGT GCGTTGTTTG ATAAGCATCG GGTATGGCAG
AACCGCCGGG GCATGATGGG CGAGGCGTTA AATCGCTTAA GTCAGACGCA GTTACGTCAG
GCCGTGCAAC TCCTGACACG AACGGAACTC ACCCTCAAAC AAGATTACGG TCAGTCAGTG
TGGGCAGAGC TGGAAGGGTT ATCTCTTCTG TTGTGCCATA AACCCCTGGC GGACGTATTT
ATCGACGGTT GA
 
Protein sequence
MIRLYPEQLR AQLNEGLRAA YLLLGNDPLL LQESQDAVRQ VAAAQGFEEH HTFSIDPNTD 
WNAIFSLCQA MSLFASRQTL LLLLPENGPN AAINEQLLTL TGLLHDDLLL IVRGNKLSKA
QENAAWFTAL ANRSVQVTCQ TPEQAQLPRW VAARAKQLNL ELDDAANQVL CYCYEGNLLA
LAQALERLSL LWPDGKLTLP RVEQAVNDAA HFTPFHWVDA LLMGKSKRAL HILQQLRLEG
SEPVILLRTL QRELLLLVNL KRQSAHTPLR ALFDKHRVWQ NRRGMMGEAL NRLSQTQLRQ
AVQLLTRTEL TLKQDYGQSV WAELEGLSLL LCHKPLADVF IDG