Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2956 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 3171379 |
End bp | 3172785 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | outer membrane porin |
Protein accession | ACX40585 |
Protein GI | 260450163 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00243761 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTACGT TTAGTGGCAA ACGTAGTACG CTGGCGCTGG CTATCGCCGG TGTTACAGCA ATGTCGGGCT TTATGGCAAT GCCGGAGGCT CGCGCCGAAG GATTCATCGA CGATTCAACC TTAACCGGCG GTATCTATTA CTGGCAGCGT GAACGCGACC GTAAAGATGT TACCGACGGC GACAAATACA AAACCAACCT TTCTCACTCC ACCTGGAATG CCAACCTCGA TTTTCAGTCC GGTTATGCTG CTGATATGTT CGGCCTTGAT ATTGCTGCGT TTACGGCGAT TGAAATGGCG GAAAACGGCG ACAGCTCCCA CCCGAACGAA ATCGCGTTTT CAAAAAGTAA TAAAGCCTAT GACGAAGACT GGTCCGGCGA CAAAAGCGGT ATAAGCCTGT ATAAAGCTGC GGCCAAATTT AAATACGGTC CGGTTTGGGC GAGGGCAGGT TACATTCAGC CAACTGGTCA AACGCTGTTA GCGCCGCACT GGAGCTTTAT GCCAGGTACT TATCAGGGGG CGGAAGCCGG GGCGAATTTT GATTACGGCG ATGCTGGTGC GTTGAGTTTC TCCTACATGT GGACCAACGA ATACAAAGCG CCGTGGCATC TGGAAATGGA TGAGTTTTAT CAGAACGATA AAACCACCAA AGTTGATTAT CTGCACTCCT TTGGGGCGAA ATACGACTTC AAAAATAACT TCGTACTGGA AGCGGCATTT GGTCAGGCGG AAGGGTATAT CGATCAATAT TTTGCCAAAG CCAGCTACAA ATTTGATATC GCCGGTAGCC CGTTAACCAC CAGCTACCAG TTCTACGGTA CCCGAGATAA AGTTGACGAT CGCAGCGTCA ACGACCTTTA TGACGGCACC GCCTGGCTGC AAGCGTTGAC CTTTGGTTAC CGGGCGGCTG ACGTAGTGGA TTTGCGCCTC GAAGGCACCT GGGTTAAGGC TGACGGTCAG CAGGGATACT TCCTGCAACG TATGACTCCA ACCTACGCTT CCTCAAACGG TCGCCTGGAT ATCTGGTGGG ATAACCGTTC TGACTTCAAC GCCAACGGCG AAAAAGCGGT CTTCTTCGGT GCGATGTATG ACCTGAAAAA CTGGAATCTT CCAGGCTTCG CCATCGGCGC TTCCTACGTT TACGCATGGG ATGCTAAACC TGCGACCTGG CAGAGCAATC CGGATGCGTA CTACGACAAA AACCGGACTA TTGAAGAGTC TGCCTACAGC CTGGATGCGG TCTATACCAT TCAGGACGGT CGCGCCAAAG GCACGATGTT CAAACTGCAT TTCACCGAAT ACGACAACCA CTCCGACATC CCAAGCTGGG GCGGTGGTTA CGGCAACATC TTCCAGGATG AGCGTGACGT GAAATTTATG GTAATCGCAC CATTCACCAT CTTCTGA
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Protein sequence | MRTFSGKRST LALAIAGVTA MSGFMAMPEA RAEGFIDDST LTGGIYYWQR ERDRKDVTDG DKYKTNLSHS TWNANLDFQS GYAADMFGLD IAAFTAIEMA ENGDSSHPNE IAFSKSNKAY DEDWSGDKSG ISLYKAAAKF KYGPVWARAG YIQPTGQTLL APHWSFMPGT YQGAEAGANF DYGDAGALSF SYMWTNEYKA PWHLEMDEFY QNDKTTKVDY LHSFGAKYDF KNNFVLEAAF GQAEGYIDQY FAKASYKFDI AGSPLTTSYQ FYGTRDKVDD RSVNDLYDGT AWLQALTFGY RAADVVDLRL EGTWVKADGQ QGYFLQRMTP TYASSNGRLD IWWDNRSDFN ANGEKAVFFG AMYDLKNWNL PGFAIGASYV YAWDAKPATW QSNPDAYYDK NRTIEESAYS LDAVYTIQDG RAKGTMFKLH FTEYDNHSDI PSWGGGYGNI FQDERDVKFM VIAPFTIF
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