Gene EcDH1_2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2488 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2667299 
End bp2668132 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content38% 
IMG OID 
ProductHNH endonuclease 
Protein accessionACX40125 
Protein GI260449703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.382497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGTTT TTGATAATAA TGGAATTGAA CTGAAAGCTG AGTGTTCGAT AGGTGAAGAG 
GATGGTGTTT ATGGTCTAAT CCTTGAGTCG TGGGGGCCGG GTGACAGAAA CAAAGATTAC
AATATCGCTC TTGATTATAT CATTGAACGG TTGGTTGATT CTGGTGTATC CCAAGTCGTA
GTATATCTGG CGTCATCATC AGTCAGAAAA CATATGCATT CTTTGGATGA AAGAAAAATC
CATCCTGGTG AATATTTTAC TTTGATTGGT AATAGCCCCC GCGATATACG CTTGAAGATG
TGTGGTTATC AGGCTTATTT TAGTCGTACG GGGAGAAAGG AAATTCCTTC CGGCAATAGA
ACGAAACGAA TATTGATAAA TGTTCCAGGT ATTTATAGTG ACAGTTTTTG GGCGTCTATA
ATACGTGGAG AACTATCAGA GCTTTCACAG CCTACAGATG ATGAATCGCT TCTGAATATG
AGGGTTAGTA AATTAATTAA GAAAACGTTG AGTCAACCCG AGGGCTCCAG GAAACCAGTT
GAGGTAGAAA GACTACAAAA AGTTTATGTC CGAGACCCGA TGGTAAAAGC TTGGATTTTA
CAGCAAAGTA AAGGTATATG TGAAAACTGT GGTAAAAATG CTCCGTTTTA TTTAAATGAT
GGAAACCCAT ATTTGGAAGT ACATCATGTA ATTCCCCTGT CTTCAGGTGG TGCTGATACA
ACAGATAACT GTGTTGCCCT TTGTCCGAAT TGCCATAGAG AATTGCACTA TAGTAAAAAT
GCAAAAGAAC TAATCGAGAT GCTTTACGTT AATATAAACC GATTACAGAA ATAA
 
Protein sequence
MHVFDNNGIE LKAECSIGEE DGVYGLILES WGPGDRNKDY NIALDYIIER LVDSGVSQVV 
VYLASSSVRK HMHSLDERKI HPGEYFTLIG NSPRDIRLKM CGYQAYFSRT GRKEIPSGNR
TKRILINVPG IYSDSFWASI IRGELSELSQ PTDDESLLNM RVSKLIKKTL SQPEGSRKPV
EVERLQKVYV RDPMVKAWIL QQSKGICENC GKNAPFYLND GNPYLEVHHV IPLSSGGADT
TDNCVALCPN CHRELHYSKN AKELIEMLYV NINRLQK