Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2332 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 2502855 |
End bp | 2503643 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | ACX39975 |
Protein GI | 260449553 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.297697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCG GCACACAGAA TCAGGCGTTC TTTCCGGAAA ACATTCTGGA GAAATTTCGT TATATCAAAG AGATGGGCTT CGATGGTTTT GAGATTGACG GCAAACTGCT GGTTAACAAC ATCGAAGAAG TCAAAGCGGC GATCAAAGAA ACCGGTTTAC CGGTGACCAC CGCCTGCGGT GGCTATGACG GATGGATTGG CGACTTTATC GAAGAGCGTC GTCTTAATGG CTTAAAGCAG ATCGAGCGCA TTCTCGAAGC GCTGGCAGAA GTGGGCGGTA AAGGCATCGT CGTTCCGGCT GCGTGGGGCA TGTTTACCTT CCGCTTACCG CCGATGACCT CGCCGCGTAG CCTGGACGGC GACCGCAAAA TGGTGAGTGA TTCCCTGCGC GTACTGGAAC AGGTCGCCGC GCGTACCGGA ACCGTGGTGT ATCTCGAACC GTTAAACCGC TATCAGGATC ATATGATCAA CACCCTCGCC GATGCCCGCC GTTACATCGT CGAAAACGAT CTTAAACATG TACAGATTAT CGGCGATTTC TATCACATGA ATATCGAAGA AGATAACCTG GCGCAGGCGC TGCATGACAA CCGCGACCTG CTCGGTCATG TGCATATTGC GGATAACCAT CGCTACCAGC CGGGCAGCGG CACCCTGGAT TTCCACGCGC TGTTTGAACA GCTGCGCGCG GATAACTATC AGGGCTATGT AGTGTACGAA GGGCGTATCC GGGCGGAAGA TCCTGCCCAG GCGTACCGTG ATTCGTTGGC CTGGTTGCGT ACCTGCTAA
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Protein sequence | MKIGTQNQAF FPENILEKFR YIKEMGFDGF EIDGKLLVNN IEEVKAAIKE TGLPVTTACG GYDGWIGDFI EERRLNGLKQ IERILEALAE VGGKGIVVPA AWGMFTFRLP PMTSPRSLDG DRKMVSDSLR VLEQVAARTG TVVYLEPLNR YQDHMINTLA DARRYIVEND LKHVQIIGDF YHMNIEEDNL AQALHDNRDL LGHVHIADNH RYQPGSGTLD FHALFEQLRA DNYQGYVVYE GRIRAEDPAQ AYRDSLAWLR TC
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