Gene EcDH1_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2030 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2188727 
End bp2189902 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content51% 
IMG OID 
Productmannose-6-phosphate isomerase, class I 
Protein accessionACX39687 
Protein GI260449265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0478981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAC TCATTAACTC AGTGCAAAAC TATGCCTGGG GCAGCAAAAC GGCGTTGACT 
GAACTTTATG GTATGGAAAA TCCGTCCAGC CAGCCGATGG CCGAGCTGTG GATGGGCGCA
CATCCGAAAA GCAGTTCACG AGTGCAGAAT GCCGCCGGAG ATATCGTTTC ACTGCGTGAT
GTGATTGAGA GTGATAAATC GACTCTGCTC GGAGAGGCCG TTGCCAAACG CTTTGGCGAA
CTGCCTTTCC TGTTCAAAGT ATTATGCGCA GCACAGCCAC TCTCCATTCA GGTTCATCCA
AACAAACACA ATTCTGAAAT CGGTTTTGCC AAAGAAAATG CCGCAGGTAT CCCGATGGAT
GCCGCCGAGC GTAACTATAA AGATCCTAAC CACAAGCCGG AGCTGGTTTT TGCGCTGACG
CCTTTCCTTG CGATGAACGC GTTTCGTGAA TTTTCCGAGA TTGTCTCCCT ACTCCAGCCG
GTCGCAGGTG CACATCCGGC GATTGCTCAC TTTTTACAAC AGCCTGATGC CGAACGTTTA
AGCGAACTGT TCGCCAGCCT GTTGAATATG CAGGGTGAAG AAAAATCCCG CGCGCTGGCG
ATTTTAAAAT CGGCCCTCGA TAGCCAGCAG GGTGAACCGT GGCAAACGAT TCGTTTAATT
TCTGAATTTT ACCCGGAAGA CAGCGGTCTG TTCTCCCCGC TATTGCTGAA TGTGGTGAAA
TTGAACCCTG GCGAAGCGAT GTTCCTGTTC GCTGAAACAC CGCACGCTTA CCTGCAAGGC
GTGGCGCTGG AAGTGATGGC AAACTCCGAT AACGTGCTGC GTGCGGGTCT GACGCCTAAA
TACATTGATA TTCCGGAACT GGTTGCCAAT GTGAAATTCG AAGCCAAACC GGCTAACCAG
TTGTTGACCC AGCCGGTGAA ACAAGGTGCA GAACTGGACT TCCCGATTCC AGTGGATGAT
TTTGCCTTCT CGCTGCATGA CCTTAGTGAT AAAGAAACCA CCATTAGCCA GCAGAGTGCC
GCCATTTTGT TCTGCGTCGA AGGCGATGCA ACGTTGTGGA AAGGTTCTCA GCAGTTACAG
CTTAAACCGG GTGAATCAGC GTTTATTGCC GCCAACGAAT CACCGGTGAC TGTCAAAGGC
CACGGCCGTT TAGCGCGTGT TTACAACAAG CTGTAA
 
Protein sequence
MQKLINSVQN YAWGSKTALT ELYGMENPSS QPMAELWMGA HPKSSSRVQN AAGDIVSLRD 
VIESDKSTLL GEAVAKRFGE LPFLFKVLCA AQPLSIQVHP NKHNSEIGFA KENAAGIPMD
AAERNYKDPN HKPELVFALT PFLAMNAFRE FSEIVSLLQP VAGAHPAIAH FLQQPDAERL
SELFASLLNM QGEEKSRALA ILKSALDSQQ GEPWQTIRLI SEFYPEDSGL FSPLLLNVVK
LNPGEAMFLF AETPHAYLQG VALEVMANSD NVLRAGLTPK YIDIPELVAN VKFEAKPANQ
LLTQPVKQGA ELDFPIPVDD FAFSLHDLSD KETTISQQSA AILFCVEGDA TLWKGSQQLQ
LKPGESAFIA ANESPVTVKG HGRLARVYNK L