Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1977 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 2133648 |
End bp | 2135021 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | MATE efflux family protein |
Protein accession | ACX39634 |
Protein GI | 260449212 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000001739 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGAAGT ATATCAGTGA AGCGCGTCTG TTATTAGCAT TAGCAATCCC GGTGATTCTC GCGCAAATCG CCCAAACTGC GATGGGTTTT GTCGATACCG TGATGGCGGG CGGCTATAGT GCCACCGACA TGGCGGCGGT CGCTATCGGT ACTTCTATCT GGCTTCCGGC GATCCTCTTT GGTCACGGAC TGCTGCTGGC ATTAACGCCG GTTATCGCGC AATTAAATGG TTCCGGTCGA CGTGAGCGCA TTGCGCATCA GGTGCGACAA GGTTTCTGGC TGGCAGGTTT TGTTTCCGTT CTCATTATGC TGGTGCTGTG GAATGCAGGT TACATTATCC GCTCCATGGA AAACATCGAT CCGGCTCTGG CGGACAAAGC CGTGGGTTAT CTGCGTGCGT TGTTGTGGGG CGCGCCGGGA TATCTGTTCT TCCAGGTTGC CCGTAACCAG TGTGAAGGTC TGGCAAAAAC CAAGCCGGGT ATGGTAATGG GCTTTATCGG CCTGCTGGTG AACATCCCGG TGAACTATAT CTTTATTTAT GGTCATTTCG GTATGCCTGA GCTCGGTGGC GTTGGTTGTG GCGTGGCTAC TGCGGCGGTG TATTGGGTCA TGTTCCTTGC CATGGTTTCT TACATTAAAC GCGCCCGCTC CATGCGCGAT ATTCGTAACG AAAAAGGCAC CGCAAAACCC GATCCTGCGG TTATGAAACG ACTGATTCAA CTCGGTTTGC CGATTGCGCT GGCACTGTTC TTTGAAGTGA CACTGTTTGC CGTCGTGGCT CTGTTAGTGT CTCCGCTCGG TATTGTTGAT GTCGCAGGAC ACCAGATTGC CCTGAACTTT AGTTCACTAA TGTTCGTGCT TCCAATGTCG CTGGCGGCAG CGGTAACTAT CCGCGTAGGT TATCGTCTGG GTCAGGGCTC AACGCTGGAT GCGCAAACCG CTGCGCGGAC CGGGCTTATG GTGGGTGTCT GTATGGCAAC CCTGACGGCC ATTTTCACGG TTTCACTGCG GGAGCAAATC GCCCTGTTGT ACAACGACAA TCCCGAGGTT GTAACGCTGG CTGCGCATTT GATGTTGCTG GCGGCGGTAT ATCAGATTTC TGACTCAATC CAGGTGATTG GCAGTGGGAT TTTGCGTGGT TATAAAGATA CGCGTTCCAT TTTCTATATT ACCTTTACGG CTTACTGGGT GCTGGGCTTG CCAAGCGGCT ATATTCTGGC ACTGACCGAT CTGGTCGTTG AACCTATGGG GCCAGCAGGC TTCTGGATAG GCTTTATTAT TGGCCTGACG TCGGCAGCCA TTATGATGAT GTTGCGTATG CGGTTCCTGC AACGTCTGCC GTCAGCCATC ATTCTGCAAC GAGCATCCCG CTAA
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Protein sequence | MQKYISEARL LLALAIPVIL AQIAQTAMGF VDTVMAGGYS ATDMAAVAIG TSIWLPAILF GHGLLLALTP VIAQLNGSGR RERIAHQVRQ GFWLAGFVSV LIMLVLWNAG YIIRSMENID PALADKAVGY LRALLWGAPG YLFFQVARNQ CEGLAKTKPG MVMGFIGLLV NIPVNYIFIY GHFGMPELGG VGCGVATAAV YWVMFLAMVS YIKRARSMRD IRNEKGTAKP DPAVMKRLIQ LGLPIALALF FEVTLFAVVA LLVSPLGIVD VAGHQIALNF SSLMFVLPMS LAAAVTIRVG YRLGQGSTLD AQTAARTGLM VGVCMATLTA IFTVSLREQI ALLYNDNPEV VTLAAHLMLL AAVYQISDSI QVIGSGILRG YKDTRSIFYI TFTAYWVLGL PSGYILALTD LVVEPMGPAG FWIGFIIGLT SAAIMMMLRM RFLQRLPSAI ILQRASR
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