Gene EcDH1_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1896 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2048744 
End bp2050222 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content58% 
IMG OID 
Productsuccinylglutamic semialdehyde dehydrogenase 
Protein accessionACX39554 
Protein GI260449132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.2733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTAT GGATTAACGG TGACTGGATA ACGGGCCAGG GCGCATCGCG TGTGAAGCGT 
AATCCGGTAT CGGGCGAGGT GTTATGGCAA GGCAATGATG CCGATGCCGC TCAGGTCGAG
CAGGCTTGTC GGGCAGCCCG TGCGGCGTTT CCGCGCTGGG CGCGGCTTTC ATTTGCTGAA
CGTCATGCCG TTGTCGAACG CTTTGCCGCA CTGCTGGAAA GCAATAAAGC CGAATTAACC
GCGATTATTG CCAGAGAAAC GGGTAAGCCG CGCTGGGAAG CGGCAACCGA AGTGACGGCG
ATGATCAATA AAATCGCGAT ATCAATTAAG GCGTATCACG TTCGTACCGG CGAGCAGCGT
AGTGAAATGC CGGACGGCGC GGCGAGCCTG CGACATCGCC CGCACGGCGT GCTGGCGGTG
TTTGGGCCGT ATAATTTCCC TGGTCATTTG CCGAACGGAC ATATCGTTCC GGCATTGCTG
GCAGGTAACA CCATTATCTT TAAACCCAGC GAACTGACAC CGTGGAGTGG CGAAGCGGTA
ATGCGTTTAT GGCAGCAGGC TGGCTTGCCG CCAGGCGTGC TGAACCTGGT GCAGGGCGGG
CGTGAAACGG GTCAGGCGCT GAGTGCGCTG GAGGATCTCG ACGGTTTGCT GTTTACCGGT
AGCGCCAATA CAGGCTACCA GTTGCATCGC CAGCTCTCCG GTCAGCCGGA GAAAATTCTC
GCCCTTGAGA TGGGCGGTAA TAATCCGCTA ATTATCGATG AGGTGGCGGA TATCGACGCG
GCTGTCCATC TGACCATTCA GTCGGCGTTT GTCACAGCCG GTCAACGCTG CACCTGCGCC
CGCCGTTTAT TGCTGAAAAG CGGGGCGCAG GGCGATGCGT TTCTTGCTCG TCTGGTTGCC
GTCAGCCAGC GATTAACGCC GGGCAACTGG GATGACGAAC CGCAGCCGTT TATTGGCGGG
CTGATTTCTG AACAGGCCGC ACAGCAGGTG GTTACTGCAT GGCAGCAACT GGAAGCGATG
GGCGGACGAC CCCTGCTTGC GCCGCGCTTA TTACAAGCAG GGACATCGTT GCTGACGCCG
GGGATCATTG AAATGACAGG CGTTGCTGGC GTACCAGATG AAGAGGTGTT CGGACCGTTA
TTGCGCGTCT GGCGTTATGA TACTTTCGAT GAAGCGATTC GAATGGCGAA TAACACTCGC
TTCGGACTCT CTTGCGGTCT GGTTTCCCCC GAGCGGGAAA AGTTCGATCA ACTGTTGCTG
GAGGCGCGGG CGGGGATTGT TAACTGGAAC AAACCGCTTA CCGGTGCTGC CAGTACCGCG
CCATTCGGCG GCATTGGTGC TTCCGGTAAC CATCGCCCCA GCGCCTGGTA TGCCGCAGAT
TACTGCGCAT GGCCGATGGC GAGCCTGGAG TCGGACTCGT TAACATTGCC CGCCACGCTT
AACCCCGGGC TGGATTTTTC CGATGAGGTG GTGCGATGA
 
Protein sequence
MTLWINGDWI TGQGASRVKR NPVSGEVLWQ GNDADAAQVE QACRAARAAF PRWARLSFAE 
RHAVVERFAA LLESNKAELT AIIARETGKP RWEAATEVTA MINKIAISIK AYHVRTGEQR
SEMPDGAASL RHRPHGVLAV FGPYNFPGHL PNGHIVPALL AGNTIIFKPS ELTPWSGEAV
MRLWQQAGLP PGVLNLVQGG RETGQALSAL EDLDGLLFTG SANTGYQLHR QLSGQPEKIL
ALEMGGNNPL IIDEVADIDA AVHLTIQSAF VTAGQRCTCA RRLLLKSGAQ GDAFLARLVA
VSQRLTPGNW DDEPQPFIGG LISEQAAQQV VTAWQQLEAM GGRPLLAPRL LQAGTSLLTP
GIIEMTGVAG VPDEEVFGPL LRVWRYDTFD EAIRMANNTR FGLSCGLVSP EREKFDQLLL
EARAGIVNWN KPLTGAASTA PFGGIGASGN HRPSAWYAAD YCAWPMASLE SDSLTLPATL
NPGLDFSDEV VR