| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1715 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 1867566 |
|---|
| End bp | 1868234 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF159 |
|---|
| Protein accession | ACX39374 |
|---|
| Protein GI | 260448952 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.286255 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGAC GCTTTGCCCA ATCCCAAACG CGTGAAGATT ACCTTGCGCT TCTCGCGGAA
GATATTGAAC GCGATATTCC CTATGATCCC GAACCCATTG GCAGATACAA CGTCGCGCCG
GGAACCAAAG TCCTACTGCT CAGTGAACGT GATGAACACC TTCATCTGGA TCCGGTTTTC
TGGGGATATG CTCCCGGATG GTGGGATAAA CCGCCGCTGA TTAACGCCCG CGTAGAAACT
GCGGCAACCA GTCGTATGTT TAAACCGCTC TGGCAACATG GTCGGGCAAT CTGTTTTGCC
GATGGCTGGT TTGAGTGGAA AAAAGAAGGC GACAAAAAAC AGCCTTTTTT TATCTATCGT
GCTGATGGAC AACCTATTTT TATGGCCGCG ATAGGTAGCA CACCATTTGA GCGTGGTGAC
GAAGCCGAAG GATTTTTGAT CGTCACTGCT GCGGCAGATC AAGGTCTGGT AGATATTCAT
GACCGCCGCC CACTGGTACT GTCGCCAGAA GCTGCGCGGG AATGGATGCG GCAAGAGATT
AGCGGTAAAG AAGCCTCAGA AATCGCGGCC AGTGGCTGTG TTCCAGCAAA CCAGTTCTCC
TGGCACCCGG TATCGCGCGC GGTGGGTAAT GTTAAAAACC AGGGCGCGGA GTTAATTCAA
CCTGTTTGA
|
|---|
| Protein sequence | MCGRFAQSQT REDYLALLAE DIERDIPYDP EPIGRYNVAP GTKVLLLSER DEHLHLDPVF
WGYAPGWWDK PPLINARVET AATSRMFKPL WQHGRAICFA DGWFEWKKEG DKKQPFFIYR
ADGQPIFMAA IGSTPFERGD EAEGFLIVTA AADQGLVDIH DRRPLVLSPE AAREWMRQEI
SGKEASEIAA SGCVPANQFS WHPVSRAVGN VKNQGAELIQ PV
|
|---|
| |