Gene EcDH1_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1648 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1796793 
End bp1797266 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content47% 
IMG OID 
Producttranscription activator effector binding protein 
Protein accessionACX39312 
Protein GI260448890 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTACG AGATTAAGCA GGAAGAGAAA CGTACCGTTG CAGGTTTCCA TCTCGTTGGC 
CCGTGGGAAC AGACGGTAAA GAAAGGCTTT GAGCAGTTGA TGATGTGGGT AGATAGCAAA
AATATTGTGC CGAAGGAGTG GGTTGCTGTC TATTACGACA ATCCAGATGA AACACCCGCC
GAAAAATTAC GCTGCGACAC CGTCGTGACG GTGCCGGGTT ACTTTACGCT TCCCGAAAAC
AGTGAGGGCG TCATTCTGAC AGAAATTACA GGTGGTCAGT ATGCGGTGGC GGTAGCTCGT
GTAGTCGGTG ATGATTTTGC TAAACCCTGG TATCAGTTCT TTAATAGTCT CTTGCAGGAC
AGTGCTTATG AAATGTTACC AAAGCCCTGC TTCGAGGTTT ATTTGAACAA TGGCGCGGAA
GATGGGTACT GGGATATCGA AATGTATGTT GCGGTGCAGC CAAAACATCA CTAA
 
Protein sequence
MNYEIKQEEK RTVAGFHLVG PWEQTVKKGF EQLMMWVDSK NIVPKEWVAV YYDNPDETPA 
EKLRCDTVVT VPGYFTLPEN SEGVILTEIT GGQYAVAVAR VVGDDFAKPW YQFFNSLLQD
SAYEMLPKPC FEVYLNNGAE DGYWDIEMYV AVQPKHH