| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1546 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 1684637 |
|---|
| End bp | 1685179 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | |
|---|
| Product | Fimbrial protein |
|---|
| Protein accession | ACX39214 |
|---|
| Protein GI | 260448792 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.358658 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTT CAATTATTGC TGCCGCTGTC TTTTCTTCTT TTTTTATGAG CGCTGGAGTA
TTTGCTGCAG ACGTTGATAC CGGAACATTA ACTATTAAGG GGAATATTGC AGAATCTCCG
TGTAAATTCG AAGCGGGTGG TGATTCAGTA AGTATTAATA TGCCGACTGT ACCAACCAGT
GTCTTTGAAG GTAAAGCTAA ATATTCTACC TATGATGATG CAGTCGGTGT AACCAGCAGC
ATGTTAAAAA TTAGCTGCCC GAAAGAAGTT GCTGGTGTAA AACTCTCGTT GATTACCAAC
GATAAAATAA CCGGTAACGA TAAGGCGATA GCCAGTAGCA ACGATACCGT GGGTTACTAT
CTCTATTTAG GTGATAACAG CGATGTCCTG GATGTTTCTG CACCTTTTAA CATTGAGAGT
TATAAAACAG CGGAAGGTCA ATATGCTATT CCGTTTAAAG CAAAATACCT GAAACTGACA
GATAACTCAG TGCAATCAGG TGATGTGTTA TCTTCTCTGG TTATGCGTGT GGCGCAGGAT
TAA
|
|---|
| Protein sequence | MKRSIIAAAV FSSFFMSAGV FAADVDTGTL TIKGNIAESP CKFEAGGDSV SINMPTVPTS
VFEGKAKYST YDDAVGVTSS MLKISCPKEV AGVKLSLITN DKITGNDKAI ASSNDTVGYY
LYLGDNSDVL DVSAPFNIES YKTAEGQYAI PFKAKYLKLT DNSVQSGDVL SSLVMRVAQD
|
|---|
| |