Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1463 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 1581955 |
End bp | 1583898 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | cytochrome c-type biogenesis protein CcmF |
Protein accession | ACX39133 |
Protein GI | 260448711 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.617817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGCCAG AAATTGGTAA CGGACTGCTG TGCCTGGCGC TGGGAATTGC GCTGCTGCTG TCCGTGTATC CGCTATGGGG CGTGGCGCGC GGAGATGCGC GCATGATGGC GTCTTCCCGC TTGTTTGCCT GGCTGCTGTT TATGTCTGTG GCTGGCGCAT TTCTGGTGCT GGTCAATGCT TTCGTGGTCA ACGACTTCAC CGTCACCTAT GTTGCCAGCA ACTCCAATAC CCAGCTTCCG GTGTGGTATC GCGTGGCGGC TACCTGGGGC GCGCATGAAG GCTCGCTACT GCTGTGGGTG CTGCTGATGA GCGGCTGGAC CTTTGCGGTG GCGATTTTTA GTCAGCGTAT TCCGCTGGAT ATTGTGGCCC GTGTACTGGC GATAATGGGG ATGGTCAGTG TCGGCTTTTT GCTGTTCATT CTCTTTACCT CTAACCCGTT CTCTCGCACG TTGCCGAACT TCCCGATTGA AGGTCGCGAT CTTAACCCGC TATTGCAGGA TCCGGGGCTG ATCTTCCATC CGCCTCTGCT TTATATGGGG TACGTGGGTT TCTCGGTGGC GTTTGCTTTT GCCATTGCTT CTTTGCTGAG CGGGCGTCTG GACAGCACTT ATGCGCGTTT TACTCGTCCG TGGACGCTGG CAGCGTGGAT CTTCCTGACG CTCGGCATCG TGCTCGGTTC CGCATGGGCC TATTACGAAC TCGGCTGGGG TGGCTGGTGG TTCTGGGATC CGGTAGAAAA CGCCTCGTTT ATGCCGTGGC TGGTGGGGAC TGCGCTGATG CACTCACTGG CGGTCACTGA ACAACGCGCC AGCTTCAAAG CGTGGACATT ACTGCTGGCA ATCAGTGCCT TCTCGTTGTG TCTGTTGGGG ACTTTCCTCG TGCGTTCCGG CGTGCTGGTA TCGGTACACG CGTTTGCGTC TGATCCGGCG CGCGGTATGT TTATCCTCGC CTTTATGGTG CTGGTGATTG GCGGTTCGCT GCTGCTGTTT GCCGCGCGTG GACACAAAGT TCGCTCACGC GTAAACAATG CGCTGTGGTC GCGGGAATCT TTGCTGTTAG CGAACAATGT TTTGCTGGTC GCTGCGATGC TGGTGGTGTT GCTGGGGACG CTGCTGCCGT TGGTGCATAA GCAACTGGGA CTGGGCAGTA TTTCGATTGG CGAACCGTTC TTCAACACCA TGTTTACCTG GCTGATGGTG CCGTTTGCGC TACTGCTTGG TGTCGGTCCT CTGGTGCGCT GGGGGCGGGA TCGCCCGCGT AAGATCCGCA ATTTATTGAT TATCGCCTTC ATCTCTACGC TGGTGCTGTC GCTGCTGTTG CCGTGGCTGT TCGAAAGCAA AGTTGTGGCG ATGACGGTGC TCGGCCTGGC AATGGCCTGC TGGATTGCGG TGCTGGCAAT TGCGGAAGCT GCGCTACGTA TTTCACGCGG CACGAAAACC ACCTTCAGTT ATTGGGGGAT GGTGGCGGCT CACCTTGGGC TGGCAGTGAC AATTGTTGGC ATTGCCTTTA GCCAGAACTA TAGCGTTGAG CGTGATGTGC GCATGAAGTC CGGCGATAGC GTCGATATTC ATGAATATCG CTTCACCTTC CGTGATGTCA AAGAGGTGAC TGGCCCGAAC TGGCGTGGCG GTGTGGCGAC TATCGGCGTA ACGCGCGATG GCAAGCCGGA AACGGTGCTG TATGCGGAAA AACGTTATTA CAACACTGCC GGGTCGATGA TGACCGAAGC GGCAATTGAC GGCGGCATCA CGCGTGACCT GTACGCGGCC CTCGGTGAAG AGCTGGAAAA CGGCGCGTGG GCCGTGCGTC TTTACTACAA ACCATTTGTT CGCTGGATTT GGGCGGGCGG GCTGATGATG GCGTTGGGCG GACTGCTGTG TCTGTTTGAT CCTCGCTATC GTAAGCGCGT GAGTCCGCAA AAAACTGCGC CGGAGGCCGT ATGA
|
Protein sequence | MMPEIGNGLL CLALGIALLL SVYPLWGVAR GDARMMASSR LFAWLLFMSV AGAFLVLVNA FVVNDFTVTY VASNSNTQLP VWYRVAATWG AHEGSLLLWV LLMSGWTFAV AIFSQRIPLD IVARVLAIMG MVSVGFLLFI LFTSNPFSRT LPNFPIEGRD LNPLLQDPGL IFHPPLLYMG YVGFSVAFAF AIASLLSGRL DSTYARFTRP WTLAAWIFLT LGIVLGSAWA YYELGWGGWW FWDPVENASF MPWLVGTALM HSLAVTEQRA SFKAWTLLLA ISAFSLCLLG TFLVRSGVLV SVHAFASDPA RGMFILAFMV LVIGGSLLLF AARGHKVRSR VNNALWSRES LLLANNVLLV AAMLVVLLGT LLPLVHKQLG LGSISIGEPF FNTMFTWLMV PFALLLGVGP LVRWGRDRPR KIRNLLIIAF ISTLVLSLLL PWLFESKVVA MTVLGLAMAC WIAVLAIAEA ALRISRGTKT TFSYWGMVAA HLGLAVTIVG IAFSQNYSVE RDVRMKSGDS VDIHEYRFTF RDVKEVTGPN WRGGVATIGV TRDGKPETVL YAEKRYYNTA GSMMTEAAID GGITRDLYAA LGEELENGAW AVRLYYKPFV RWIWAGGLMM ALGGLLCLFD PRYRKRVSPQ KTAPEAV
|
| |