Gene EcDH1_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1411 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1515558 
End bp1516763 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content52% 
IMG OID 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionACX39083 
Protein GI260448661 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.697139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTAC CAAAAATTAA ACAGGTTCGC GCCTGGTTTA CTGGCGGTGC GACAGCAGAA 
AAAGGCGCTG GCGGCGGTGA TTATCACGAC CAGGGGGCGA ATCACTGGAT AGACGATCAT
ATTGCCACCC CGATGAGTAA ATACCGCGAT TACGAGCAGT CACGCCAGTC ATTTGGCATT
AACGTTCTTG GCACGTTGGT TGTTGAAGTC GAAGCAGAAA ACGGCCAGAC CGGATTCGCC
GTTTCGACAG CCGGTGAAAT GGGCTGTTTT ATTGTCGAAA AACATCTTAA CCGTTTCATT
GAGGGTAAAT GTGTCAGTGA TATCAAACTG ATCCACGATC AAATGCTCAG TGCCACCCTG
TATTACTCCG GCTCTGGTGG CCTGGTGATG AATACGATTT CTTGTGTCGA TCTGGCTCTG
TGGGATCTGT TCGGCAAAGT GGTCGGGCTT CCGGTTTATA AACTTTTAGG CGGCGCTGTT
CGTGATGAGA TTCAGTTCTA CGCCACAGGT GCGCGTCCGG ATCTGGCAAA AGAGATGGGC
TTTATCGGTG GCAAAATGCC GACGCACTGG GGGCCACATG ATGGCGATGC GGGGATCCGC
AAAGATGCCG CTATGGTCGC GGATATGCGT GAAAAATGCG GTGAGGATTT CTGGTTAATG
CTCGACTGCT GGATGAGTCA GGACGTGAAC TATGCGACCA AACTGGCCCA CGCTTGCGCG
CCCTATAACC TGAAATGGAT CGAAGAGTGC CTGCCGCCAC AGCAGTATGA AAGTTATCGC
GAACTGAAAC GCAACGCGCC AGTCGGAATG ATGGTCACCA GCGGTGAGCA CCACGGCACA
CTGCAATCTT TTCGTACGCT TTCAGAAACC GGTATCGACA TTATGCAGCC GGATGTTGGC
TGGTGCGGTG GTTTAACCAC GCTGGTGGAA ATTGCCGCAA TCGCCAAATC CAGGGGGCAA
CTGGTGGTGC CGCACGGTTC GTCTGTTTAC TCTCACCATG CGGTGATCAC CTTCACCAAT
ACGCCATTCA GCGAATTCCT GATGACCAGC CCGGATTGTT CAACGATGCG TCCGCAGTTT
GACCCGATTC TGCTCAATGA GCCGGTTCCG GTGAATGGTC GTATTCATAA ATCAGTGCTT
GATAAACCCG GTTTTGGCGT CGAACTCAAT CGTGACTGCA ATTTGAAACG CCCCTACAGC
CACTAA
 
Protein sequence
MTLPKIKQVR AWFTGGATAE KGAGGGDYHD QGANHWIDDH IATPMSKYRD YEQSRQSFGI 
NVLGTLVVEV EAENGQTGFA VSTAGEMGCF IVEKHLNRFI EGKCVSDIKL IHDQMLSATL
YYSGSGGLVM NTISCVDLAL WDLFGKVVGL PVYKLLGGAV RDEIQFYATG ARPDLAKEMG
FIGGKMPTHW GPHDGDAGIR KDAAMVADMR EKCGEDFWLM LDCWMSQDVN YATKLAHACA
PYNLKWIEEC LPPQQYESYR ELKRNAPVGM MVTSGEHHGT LQSFRTLSET GIDIMQPDVG
WCGGLTTLVE IAAIAKSRGQ LVVPHGSSVY SHHAVITFTN TPFSEFLMTS PDCSTMRPQF
DPILLNEPVP VNGRIHKSVL DKPGFGVELN RDCNLKRPYS H