| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_0563 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 595754 |
|---|
| End bp | 596338 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | Fimbrial protein |
|---|
| Protein accession | ACX38251 |
|---|
| Protein GI | 260447829 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAG TTACAAAAAC AGCTATTGCG GGCTTACTTG CGCTTTTCGC AGGTAATGCC
GCTGCAACCG ATGGTGAAAT AGTTTTTGAT GGCGAGATTT TAAAATCCGC TTGTGAAATC
AATGACTCTG ATAAGAAAAT TGAAGTTGCT CTTGGTCACT ATAATGCCGA ACAGTTTCGT
AATATTGGCG AGCGTAGCCC AAAAATTCCA TTCACTATTC CTTTAGTTAA CTGCCCAATG
ACTGGGTGGG AGCACGATAA CGGCAACGTT GAAGCGTCTT TCCGTCTATG GCTGGAAACG
CGAGATAATG GCACCGTCCC TAACTTCCCT AATCTGGCAA AAGTAGGCTC TTTTGCTGGC
ATAGCGGCAA CAGGTGTGGG TATCCGTATT GACGATGCGG AAAGCGGAAA CATTATGCCA
CTGAATGCTA TGGGCAATGA TAACACGGTT TATCAGATCC CGGCGGAATC CAATGGTATT
GTCAATGTTG ACCTCATCGC TTACTACGTA TCAACCGTAG TTCCATCAGA AATCACCCCA
GGGGAAGCAG ACGCTATCGT TAACGTAACG CTGGATTACC GTTAA
|
|---|
| Protein sequence | MNKVTKTAIA GLLALFAGNA AATDGEIVFD GEILKSACEI NDSDKKIEVA LGHYNAEQFR
NIGERSPKIP FTIPLVNCPM TGWEHDNGNV EASFRLWLET RDNGTVPNFP NLAKVGSFAG
IAATGVGIRI DDAESGNIMP LNAMGNDNTV YQIPAESNGI VNVDLIAYYV STVVPSEITP
GEADAIVNVT LDYR
|
|---|
| |