Gene ECD_01472 details

Gene Information

• Locus tag: ECD_01472
• Symbol: ydeZ
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: +
• Start bp: 1552317
• End bp: 1553114
• Gene Length: 798 bp
• Protein Length: 265 aa
• Translation table: 11
• GC content: 54%
• Product: AI2 transporter
• Protein accession: ACT43349
• Protein GI: 253977679

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAGT CGGAACCGAA AGCAATTGCA TTGGGCGTAC TGTTTCAAAG TGGTGTGCCG 
ATGCCGCTGG CGATACTCCT GACCTTACTG CTCGGCGCAT TGTGCGGGCT GATCAACGCC 
GGATTAATTA TCTATACCAA AGTTAACCCG CTGGTGATTA CGCTTGGCAC GCTGTATCTG 
TTTGCCGGAA GCGCTCTGCT GCTTTCCGGT ATGGCCGGAG CGACGGGGTA CGAAGGTATT 
GGTGGATTCC CGATGGCGTT TACAGATTTC GCTAACCTGG ATGTGCTGGG ACTCCCCGTT 
CCGCTGATTA TCTTCCTGAT ATGTCTCCTC GTTTTCTGGC TCTGGCTGCA TAAAACCCAT 
GCCGGACGTA ATGTGTTTTT GATTGGGCAA AGCCCGCGCG TGGCGCTTTA TAGCGCGATT 
CCAGTTAACC GCACCTTATG TGCGCTCTAT GCCATGACGG GGCTGGCGTC TGCGGTCGCC 
GCTGTGCTGC TGGTATCGTA TTTTGGTTCA GCACGTTCCG ATCTCGGTGC GTCGTTTCTG 
ATGCCCGCCA TCACCGCCGT GGTGCTTGGC GGTGCCAATA TTTATGGTGG TTCCGGTTCC 
ATTATCGGCA CCGCCATTGC GGTTTTATTA GTGGGATATT TGCAACAAGG TTTGCAAATG 
GCAGGAGTGC CAAATCAGGT GTCCAGCGCC CTTTCCGGTG CGCTACTTAT CGTCGTTGTC 
GTAGGTCGTT CCGTTAGCCT GCATCGCCAG CAAATTAAAG AGTGGCTGGC GCGTCGGGCC 
AATAACCCAT TGCCATAA 

 

Protein sequence

MAESEPKAIA LGVLFQSGVP MPLAILLTLL LGALCGLINA GLIIYTKVNP LVITLGTLYL 
FAGSALLLSG MAGATGYEGI GGFPMAFTDF ANLDVLGLPV PLIIFLICLL VFWLWLHKTH 
AGRNVFLIGQ SPRVALYSAI PVNRTLCALY AMTGLASAVA AVLLVSYFGS ARSDLGASFL 
MPAITAVVLG GANIYGGSGS IIGTAIAVLL VGYLQQGLQM AGVPNQVSSA LSGALLIVVV 
VGRSVSLHRQ QIKEWLARRA NNPLP