| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_01237 |
|---|
| Symbol | trpD |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 1305381 |
|---|
| End bp | 1306976 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase |
|---|
| Protein accession | ACT43127 |
|---|
| Protein GI | 253977457 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACA TTCTGCTGCT CGATAATATC GACTCTTTTA CGTACAACCT GGCAGATCAG
TTGCGCAGCA ATGGTCATAA CGTGGTGATT TACCGCAACC ATATTCCGGC GCAGACCTTA
ATTGAACGCC TGGCGACGAT GAGCAATCCG GTACTGATGC TTTCTCCTGG CCCCGGTGTG
CCGAGCGAAG CCGGTTGTAT GCCGGAACTC CTCACCCGCT TGCGTGGCAA GCTGCCCATT
ATTGGCATTT GCCTCGGACA TCAGGCAATT GTCGAAGCTT ACGGGGGCTA TGTCGGTCAG
GCGGGCGAAA TTCTTCACGG TAAAGCGTCG AGCATTGAAC ATGACGGTCA GGCGATGTTT
GCCGGATTAA CAAACCCGCT GCCGGTGGCG CGTTATCACT CGCTGGTTGG CAGTAACATT
CCGGCCGGTT TAACCATCAA CGCCCATTTT AATGGCATGG TGATGGCAGT ACGTCACGAT
GCGGATCGCG TTTGTGGATT CCAGTTCCAT CCGGAATCCA TTCTCACCAC CCAGGGCGCT
CGCCTGCTGG AACAAACGCT GGCCTGGGCG CAGCAGAAAC TAGAGCCAGC CAACACGCTG
CAACCGATTC TGGAAAAACT GTATCAGGCG CAGACGCTTA GCCAACAAGA AAGCCACCAG
CTGTTTTCAG CGGTGGTGCG TGGCGAGCTG AAGCCGGAAC AACTGGCGGC GGCGCTGGTG
AGCATGAAAA TTCGCGGTGA GCACCCGAAC GAGATCGCCG GAGCAGCAAC CGCGCTACTG
GAAAACGCCG CGCCGTTCCC GCGCCCGGAT TATCTGTTTG CTGATATCGT CGGTACTGGC
GGTGACGGCA GCAACAGTAT CAATATTTCT ACCGCCAGTG CGTTTGTCGC CGCGGCCTGT
GGGCTGAAAG TGGCGAAACA CGGCAACCGT AGCGTCTCCA GTAAATCTGG TTCGTCCGAT
CTGCTGGCGG CGTTCGGTAT TAATCTTGAT ATGAACGCCG ATAAATCGCG CCAGGCGCTG
GATGAGTTAG GTGTATGTTT CCTCTTTGCG CCGAAGTATC ACACCGGATT CCGCCACGCG
ATGCCGGTTC GCCAGCAACT GAAAACCCGC ACCCTGTTCA ATGTGCTGGG GCCATTGATT
AACCCGGCGC ATCCGCCGCT GGCGTTAATT GGTGTTTATA GTCCGGAACT GGTGCTGCCG
ATTGCCGAAA CCTTGCGCGT GCTGGGGTAT CAACGCGCGG CGGTGGTGCA CAGCGGCGGG
ATGGATGAAG TTTCATTACA CGCGCCGACA ATCGTTGCCG AGCTGCATGA CGGCGAAATT
AAGAGCTATC AATTGACCGC TGAAGATTTT GGCCTGACTC CCTACCACCA GGAGCAACTG
GCAGGCGGAA CACCGGAAGA AAACCGTGAC ATTTTAACAC GCTTGTTACA AGGTAAAGGC
GACGCCGCCC ATGAAGCAGC CGTCGCTGCG AACGTCGCCA TGTTAATGCG CCTGCATGGC
CATGAAGATC TGCAAGCCAA TGCGCAAACC GTTCTTGAGG TACTGCGCAG TGGTTCCGCT
TACGACAGAG TTACCGCACT GGCGGCACGA GGGTAA
|
|---|
| Protein sequence | MADILLLDNI DSFTYNLADQ LRSNGHNVVI YRNHIPAQTL IERLATMSNP VLMLSPGPGV
PSEAGCMPEL LTRLRGKLPI IGICLGHQAI VEAYGGYVGQ AGEILHGKAS SIEHDGQAMF
AGLTNPLPVA RYHSLVGSNI PAGLTINAHF NGMVMAVRHD ADRVCGFQFH PESILTTQGA
RLLEQTLAWA QQKLEPANTL QPILEKLYQA QTLSQQESHQ LFSAVVRGEL KPEQLAAALV
SMKIRGEHPN EIAGAATALL ENAAPFPRPD YLFADIVGTG GDGSNSINIS TASAFVAAAC
GLKVAKHGNR SVSSKSGSSD LLAAFGINLD MNADKSRQAL DELGVCFLFA PKYHTGFRHA
MPVRQQLKTR TLFNVLGPLI NPAHPPLALI GVYSPELVLP IAETLRVLGY QRAAVVHSGG
MDEVSLHAPT IVAELHDGEI KSYQLTAEDF GLTPYHQEQL AGGTPEENRD ILTRLLQGKG
DAAHEAAVAA NVAMLMRLHG HEDLQANAQT VLEVLRSGSA YDRVTALAAR G
|
|---|
| |