| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_00660 |
|---|
| Symbol | ybfO |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | + |
|---|
| Start bp | 691743 |
|---|
| End bp | 693176 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | conserved protein, rhs-like protein |
|---|
| Protein accession | ACT42536 |
|---|
| Protein GI | 253976866 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCCGG ATAACCGTAT CGCCCGTGAC GCGCACTATC TTTACCGGTA TGACCGTCAC
GGCAGGCTGA CGGAGAAAAC CGACCTCATC CCGGAAGGGG TTATCCGCAC GGATGATGAG
CGCACCCACC GGTACCATTA CGACAGTCAG CACCGGCTGG TGCACTACAC GCGGACACAA
TATGCAGAGC CGCTGGTCGA AAGCCGCTAT CTTTACGACC CGCTGGGCCG CAGGGTGGCA
AAACGGGTAT GGCGACGTGA ACGGGACCTG ACGGGCTGGA TGTCGCTGTC ACGGAAACCG
CAAGTGACCT GGTACGGCTG GGACGGCGAC CGGCTGACCA CGATACAGAA CGACAGGAGC
CGCATCCAGA CGATTTATCA GCCGGGGAGC TTCACACCAC TCATCAGAGT TGAAACTGCC
ACCGGTGAAC TGGCCAGAAC GCAGCGCCGC AGCCTGGCGG ATGCGCTTCA GCAGTCCGGC
GGCGAAGACG GTGGCAGTGT GGTGTTCCCG CCGGTGCTGG TGCAGATGCT CGACCGGCTG
GAAAGTGAAA TCCTGGCTGA CCGGGTGAGT GAGGAAAGCC GCCGCTGGCT GGCATCGTGC
GGCCTGACCG TGGAGCAGAT GCAAAACCAG ATGGACCCGG TGTACACGCC GGCGCGAAAA
ATCCACCTGT ACCACTGCGA CCATCGCGGC CTGCCGCTGG CGCTTGTCAG CACGGAAGGG
GCAACAGAAT GGTGCGCAGA ATACGATGAA TGGGGCAACC TGCTGAATGA AGAGAACCCG
CATCAGCTGC AGCAGCTTAT CCGCCTGCCG GGGCAGCAGT ATGATGAGGA GTCCGGCCTG
TATTACAACC GCCACCGCTA TTATGACCCG CTGCAGGGGA GGTATATCAC TCAGGATCCG
ATTGGGCTGA AGGGGGGATG GAATTTTTAT CAGTATCCGC TGAATCCGGT TCAGTATATA
GATTCAATGG GACTGGCATC AAAATATGGA CACTTAAATA ATGGCGGATA TGGAGCGAGA
CCCAACAAAC CGCCTACGCC CGATCCAAGT AAATTGCCGG ACATAGCGAA ACAATTAAGA
CTGCCATATC CTATTGACCA GGCCAGTAGT GCGCCTAATG TTTTCAAAAC ATTCTTCAGA
GCATTAAGCC CTTACGACTA CACACTGTAT TGCAGGAAGT GGGTAAAACC AAATCTGACT
TGTACGCCAC AGGATGATTC CCAGTATCCA GGGATGGATA CAAAGACAGC AAGTGATTAC
CTGCCACAGA CAAATTGGCC AACAACTCAA TTACCACCAG GATATACTTG TGCAGAACCC
TATTTATTCC CAGACATTAA TAAACCCGAT GGGCCAGCAA CAGCAGGGAT AGATGATTTG
GGTGAAATTT TAGCTAAGAT GAAACAGAGA ACATCGAGAG GAATAAGAAA ATGA
|
|---|
| Protein sequence | MWPDNRIARD AHYLYRYDRH GRLTEKTDLI PEGVIRTDDE RTHRYHYDSQ HRLVHYTRTQ
YAEPLVESRY LYDPLGRRVA KRVWRRERDL TGWMSLSRKP QVTWYGWDGD RLTTIQNDRS
RIQTIYQPGS FTPLIRVETA TGELARTQRR SLADALQQSG GEDGGSVVFP PVLVQMLDRL
ESEILADRVS EESRRWLASC GLTVEQMQNQ MDPVYTPARK IHLYHCDHRG LPLALVSTEG
ATEWCAEYDE WGNLLNEENP HQLQQLIRLP GQQYDEESGL YYNRHRYYDP LQGRYITQDP
IGLKGGWNFY QYPLNPVQYI DSMGLASKYG HLNNGGYGAR PNKPPTPDPS KLPDIAKQLR
LPYPIDQASS APNVFKTFFR ALSPYDYTLY CRKWVKPNLT CTPQDDSQYP GMDTKTASDY
LPQTNWPTTQ LPPGYTCAEP YLFPDINKPD GPATAGIDDL GEILAKMKQR TSRGIRK
|
|---|
| |