Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_00483 |
Symbol | sfmH |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 531435 |
End bp | 532412 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | predicted fimbrial-like adhesin protein |
Protein accession | ACT42382 |
Protein GI | 253976712 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATGTT TGTGTCTGGC AAACATATCC TGGGCTACTG TTTGTGCAAA TAGTACTGGC GTAGCAGAAG ATGAACACTA TGATCTCTCA AATATCTTTA ATAGCACCAA TAACCAGCCA GGGCAGATTG TTGTTTTACC GGAAAAATCC GGCTGGGTAG GTGTCTCAGC AATTTGTCCA CCCGGTACGC TGGTGAATTA TACATACCGT AGTTATGTCA CCAACTTTAT TGTTCAGGAA ACTATCGATA ATTATAAATA TATGCAATTA CATGATTATC TATTAGGTGC GATGAGTCTG GTTGATAGTG TGATGGATAT TCAGTTCCCC CCGCAAAATT ATATTCGGAT GGGAACAGAT CCTAACGTTT CGCAAAACCT TCCATTCGGG GTGATGGATT CTCGTTTAAT ATTTCGTTTA AAGGTTATTC GTCCCTTTAT TAACATGGTG GAGATCCCCA GACAGGTGAT GTTTACCGTG TATGTGACAT CAACGCCTTA CGATCCGTTG GTTACACCTG TTTATACCAT TAGTTTTGGT GGCCGGGTTG AAGTGCCGCA AAACTGCGAA TTAAATGCCG GGCAGATTGT TGAATTTGAT TTTGGTGATA TCGGCGCATC GTTATTTAGT GCGGCAGGGC CGGGGAATCG ACCAGCTGGC GTCATGCCGC AAACCAAGAG CATTGCGGTC AAATGTACGA ATGTTGCTGC GCAGGCTTAT TTAACAATGC GTCTGGAAGC CAGTGCCGTT TCTGGTCAGG CGATGGTGTC GGACAATCAG GATTTAGGTT TTATTGTCGC CGATCAGAAC GATACGCCGA TTACGCCTAA CGATCTCAAT AGCGTTATTC CTTTCCGTCT GGATGCAGCT GCGGCAGCCA ATGTCACACT TCGCGCCTGG CCTATCAGTA TTACCGGTCA AAAACCGACC GAGGGGCCGT TTAGCGCGCT GGGGTATTTA CGCGTCGATT ATCAATGA
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Protein sequence | MACLCLANIS WATVCANSTG VAEDEHYDLS NIFNSTNNQP GQIVVLPEKS GWVGVSAICP PGTLVNYTYR SYVTNFIVQE TIDNYKYMQL HDYLLGAMSL VDSVMDIQFP PQNYIRMGTD PNVSQNLPFG VMDSRLIFRL KVIRPFINMV EIPRQVMFTV YVTSTPYDPL VTPVYTISFG GRVEVPQNCE LNAGQIVEFD FGDIGASLFS AAGPGNRPAG VMPQTKSIAV KCTNVAAQAY LTMRLEASAV SGQAMVSDNQ DLGFIVADQN DTPITPNDLN SVIPFRLDAA AAANVTLRAW PISITGQKPT EGPFSALGYL RVDYQ
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