| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_00250 |
|---|
| Symbol | yagX |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 276992 |
|---|
| End bp | 279517 |
|---|
| Gene Length | 2526 bp |
|---|
| Protein Length | 841 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | predicted aromatic compound dioxygenase |
|---|
| Protein accession | ACT42149 |
|---|
| Protein GI | 253976479 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTAC GACGGTTCTC CCCAGGACTG AAAGCCCAGT TTGCCTTCGG CATGGTCTTT
TTGTTCGTTC AGCCCGATGC CAGCGCTGCT GACATAAGTG CGCAGCAAAT AGGTGGGGTG
ATTATTCCGC AGGCCTTCAG TCAGGCGCTT CAGGACGGCA TGAGCGTCCC GCTCTATATT
CATCTCGCCG GTAGCCAGGG TCGCCAGGAC GATCAGCGAA TCGGCAGCGC TTTTATCTGG
CTGGATGATG GACAGCTACG CATCCGGAAA ATACAGCTGG AAGAGAGTGA AGATAACGCC
AGTGTCAGCG AACAAACTCG ACAGCAGCTG ATGGCTCTGG CGAACGCCCC GTTCAATGAG
GCCCTTACCA TCCCCCTGAC TGACAACGCG CAGCTGGATC TCAGCTTGCG CCAACTGCTG
CTGCAGCTGG TGGTCAAGCG CGAAGCGCTG GGCACCGTAC TACGCTCACG TAGCGAAGAC
ATCGGGCAGT CCAGTGTTAA CACCCTCAGC AGTAATCTGA GCTATAACTT CGGCATCTAT
AACAACCAGT TGCGTAACGG CGGGAGTAAC ACATCCAGCT ATCTGTCGCT GAATAACGTT
ACTGCACTGC GCGAACATCA TGTGGTGCTC GACGGCTCGC TGTACGGGAT CGGTAGCGGT
CAACAGGACA GTGAATTATA TAAAGCGATG TATGAACGCG ATTTTGCCGG TCACCGATTT
GCCGGTGGAA TGCTCGACAC CTGGAACTTG CAGTCCTTAG GGCCGATGAC CGCCATTTCA
GCAGGGAAGA TTTACGGCCT TTCCTGGGGA AACCAGGCCA GCTCCACCAT CTTCGACAGC
AGCCAGTCAG CCACGCCAGT GATCGCCTTT TTACCGGCGG CGGGCGAAGT ACATCTCACC
CGTGATGGGC GGTTACTAAG CGTTCAGAAC TTCACCATGG GCAATCATGA AGTGGATACC
CGGGGTCTAC CGTACGGTAT TTACGATGTG GAAGTTGAGG TGATCGTTAA CGGTCGCGTG
ATCAGCAAAC GCACTCAACG GGTCAATAAG CTGTTTAGCC GGGGGCGCGG CGTCGGTGCA
CCACTGGCGT GGCAGATATG GGGCGGTAGC TTTCATATGG ATCGCTGGTC GGAAAACGGG
AAAAAGACGC GACCAGCTAA AGAGAGTTGG CTGGCAGGTG CCTCGACCTC CGGCTCACTG
AGTACGCTTA GCTGGGCGGC AACGGGATAT GGATACGATA ATCAGGCGGT GGGTGAAACC
CGTCTGACGC TGCCGCTTGG GGGGGCGATC AACGTTAACC TGCAAAATAT GCTGGCCAGT
GACAGCTCAT GGAGCAACAT CGCCAGCATC AGCGCCACTC TACCGGGAGG CTTTAGTTCG
CTGTGGGTTA ACCAGGAAAA AACCCGCATT GGCAATCAAT TGCGACGTAG CGATGCCGAC
AACCGTGCAA TCGGCGGCAC ACTCAACCTG AACTCACTGT GGTCGAAGCT GGGCACATTC
AGCATCAGCT ACAATGATGA CCGCCGTTAC AACAGCCATT ATTACACGGC AGATTACTAT
CAAAATGTCT ACAGCGGTCC CTTTGGTTCG CTTGGCCTGC GGGCCGGTAT TCAGCGCTAT
AACAACGGCG ACAGCAACGC CAATACAGGG AAATATATCG CTCTCGATCT CTCGCTACCA
CTGGGCAACT GGTTTAGCGC AGGGATGACT CATCAAAACG GCTACACCAT GGCAAACCTG
TCAGCACGCA AGCAGTTTGA TGAAGGGACC ATTCGCACTG TTGGTGCCAA TCTGTCACGA
GCCATCTCCG GCGATACCGG TGATGACAAA ACTCTCAGTG GTGGGGCGTA TGCACAGTTC
GACGCTCGCT ACGCCAGCGG AACGCTGAAC GTCAATAGCG CGGCGGACGG CTACGTCAAT
ACCAACTTGA CCGCCAATGG CAGCGTCGGC TGGCAGGGTA AAAACATTGC TGCCAGCGGG
CGGACTGATG GCAACGCTGG GGTGATATTC AACACCGGGC TGGAGGACGA CGGTCAGATC
AGCGCCAAAA TCAACGGGCG GATTTTCCCA CTTAACGGCA AGCGTAACTA TCTCCCACTC
TCTCCCTATG GAAGATATGA GGTGGAGTTA CAGAACAGCA AAAACTCCCT CGACAGCTAC
GATATCGTCA GCGGCCGCAA AAGTCATCTG ACTCTCTATC CAGGCAATGT CGCTGTCATT
GAGCCAGAGG TGAAGCAGAT GGTTACCGTC TCCGGTCGTA TCCGTGCGGA AGACGGCACA
CTGCTGGCTA ACGCACGGAT TAACAACCAT ATCGGCCGAA CCCGAACCGA TGAAAACGGC
GAGTTTGTCA TGGACGTGGA TAAGAAATAC CCCACTATCG ATTTTCGCTA CAGTGGCAAT
AAAACCTGCG AAGTGGCTCT GGAACTCAAC CAGGCGCGCG GTGCCGTCTG GGTCGGTGAT
GTGGTCTGCA GCGGCCTCTC ATCGTGGGCG GCGGTGACGC AGACAGGAGA AGAGAATGAG
AGTTAA
|
|---|
| Protein sequence | MPLRRFSPGL KAQFAFGMVF LFVQPDASAA DISAQQIGGV IIPQAFSQAL QDGMSVPLYI
HLAGSQGRQD DQRIGSAFIW LDDGQLRIRK IQLEESEDNA SVSEQTRQQL MALANAPFNE
ALTIPLTDNA QLDLSLRQLL LQLVVKREAL GTVLRSRSED IGQSSVNTLS SNLSYNFGIY
NNQLRNGGSN TSSYLSLNNV TALREHHVVL DGSLYGIGSG QQDSELYKAM YERDFAGHRF
AGGMLDTWNL QSLGPMTAIS AGKIYGLSWG NQASSTIFDS SQSATPVIAF LPAAGEVHLT
RDGRLLSVQN FTMGNHEVDT RGLPYGIYDV EVEVIVNGRV ISKRTQRVNK LFSRGRGVGA
PLAWQIWGGS FHMDRWSENG KKTRPAKESW LAGASTSGSL STLSWAATGY GYDNQAVGET
RLTLPLGGAI NVNLQNMLAS DSSWSNIASI SATLPGGFSS LWVNQEKTRI GNQLRRSDAD
NRAIGGTLNL NSLWSKLGTF SISYNDDRRY NSHYYTADYY QNVYSGPFGS LGLRAGIQRY
NNGDSNANTG KYIALDLSLP LGNWFSAGMT HQNGYTMANL SARKQFDEGT IRTVGANLSR
AISGDTGDDK TLSGGAYAQF DARYASGTLN VNSAADGYVN TNLTANGSVG WQGKNIAASG
RTDGNAGVIF NTGLEDDGQI SAKINGRIFP LNGKRNYLPL SPYGRYEVEL QNSKNSLDSY
DIVSGRKSHL TLYPGNVAVI EPEVKQMVTV SGRIRAEDGT LLANARINNH IGRTRTDENG
EFVMDVDKKY PTIDFRYSGN KTCEVALELN QARGAVWVGD VVCSGLSSWA AVTQTGEENE
S
|
|---|
| |