Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_00138 |
Symbol | htrE |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 155671 |
End bp | 158271 |
Gene Length | 2601 bp |
Protein Length | 866 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | predicted outer membrane usher protein |
Protein accession | ACT42039 |
Protein GI | 253976369 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.242509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTATAA AACCAACTAA AAATTATCAT AATCATCTGA CCCGTATCGC TACGTTTTGC GCGCTGCTGT ATTGCAATAG TGCTTTCTGT GCTGAACTTG TTGAATATGA CCATACCTTC CTGATGGGGC AGAATGCCTC AAATATTGAT CTCAGCCGGT ATAGTGAAGG TAACCCTGCT ATACCGGGTA TGTACGACCT CAGTGTTTAT GTCAACGATC AACCTATTAT TAACCAAAGC ATTACATTTA TTGAAATTGA AGGAAAAAAA AACGCACAAG CCTGTATCAC ACTTAAGAAT TTATTGCAGT TTCATATAAA TTCTCCCGAT ATAAATAACG AAAAAGCCGT TCTGCTTGCC AGGGATGAAA CACTCGGCAA TTGCCTTAAT TTGACGAAAA TTATCCCTCA GGCTTCTGTT CGTTATGACG TTAACGAGCA ACGTCTGGAT ATAGACGTTC CTCAGGCATG GGTAATGAAA AATTACCAAA ACTATGTTGA TCCATCGTTA TGGGAAAATG GCATTAATGC GGCCATGTTG TCATACAACC TCAACGGATA TCATAGTGAA ACTCCTGGTC GAAGAAATGA CAGCATTTAT GCTGCTTTTA ACGGTGGGAT GAATTTAGGT GCATGGCGAC TGCGTGCCTC AGGCAACTAC AACTGGATGA CCGATTCTGG CAGTAATTAT GATTTTAAGA ATCGGTATAT ACAGCGTGAT ATCGCCTCGC TGCGTTCTCA ACTCATTCTT GGTGAGTCTT ATACAACGGG CGAAACCTTT GATTCTGTCA GTATCCGCGG CATTCGTTTA TACAGCGACA GCCGCATGTT GCCTCCGACA TTAGCGAGTT TTGCGCCTAT CATTCATGGC GTTGCTAATA CCAACGCCAA AGTCACTATT ACGCAAGGTG GCTATAAGAT TTATGAAACG ACTGTGCCGC CAGGCGCTTT CGTCATTGAT GATCTGAGTC CGTCAGGTTA CGGCAGCGAT CTTATTGTTA CTGTCGAAGA ATCCGATGGC TCAAAGCGGA CATTCTCGCA ACCTTTTTCA TCGGTCGTTC AAATGTTACG CCCTGGCGTT GGACGTTGGG ATATTAGCGG CGGCCAGGTC TTAAAAGATG ATATTCAGGA TGAGCCTAAT TTATTTCAGG CCAGCTACTA CTACGGTCTG AATAACTATC TAACGGGTTA TACTGGTATT CAGATTACCG ATAATAACTA TACCGCTGGT TTGTTAGGTC TTGGTCTGAA TACTTCAGTC GGTGCATTTT CTTTCGATGT GACTCACTCC AATGTTCGTA TACCGGATGA TAAAACATAT CAGGGACAAA GTTATCGTGT TTCCTGGAAC AAGTTATTCG AAGAAACAAG TACTTCACTG AATATCGCGG CCTATCGCTA TTCGACACAG AATTACCTTG GTCTTAATGA TGCACTAACT CTAATTGATG AAGTGAAACA TCCCGAACAA GATCTTGAAC CGAAATCCAT GCGTAATTAC TCGCGCATGA AAAATCAGGT TACGGTCAGT ATTAACCAAC CGCTAAAATT TGAGAAAAAA GATTACGGTT CATTTTATCT TTCCGGAAGT TGGTCCGATT ACTGGGCTTC CGGACAAAAT CGTAGCAATT ACTCTATTGG CTACAGTAAC AGTGCATCCT GGGGCAGCTA CAGTGTCAGT GCCCAGCGTT CATGGAATGA AGACGGCGAC ACTGACGATA GCGTTTATCT CAGTTTCACC ATTCCTATTG AAAAATTACT TGGCACTGAA CAACGGACTT CAGGTTTCCA GAGTATTGAT ACTCAAATGA GCAGTGACTT TAAGGGTAAT AACCAACTCA ACGTCAGTAG CAGTGGCTAT AGTGATAACG CTCGCGTCAG TTATAGCGTA AATACTGGCT ATACGATGAA TAAAGCCAGC AAAGATTTGA GTTATGTTGG GGGTTATGCC AGCTATGAAT CACCGTGGGG AACCCTGGCA GGTTCAGTTT CTGCAAATAG CGATAACAGT CGTCAAGTGT CTCTCAGCAC CGACGGTGGT TTTGTATTGC ATAGCGGCGG CCTGACCTTC AGTAATGACA GTTTTAGCGA CTCCGATACA CTGGCGGTAG TTCAGGCTCC AGGTGCTCAA GGAGCGCGAA TAAATTATGG CAACAGTACT ATCGATCGAT GGGGTTATGG TGTCACCAGC GCTCTTTCTC CTTATCATGA AAACCGTATC GCGCTGGATA TCAACGATCT TGAGAACGAT GTTGAATTAA AAAGTACCAG TGCAGTAGCT GTACCGCGTC AGGGTTCAGT CGTCTTTGCT GATTTTGAAA CCGTGCAAGG GCAATCAGCC ATTATGAACA TCACACGAAG TGATGGTAAA AATATTCCAT TTGCTGCAGA TATTTATGAT GAGCAAGGCA ATGTCATTGG TAATGTTGGA CAGGGTGGAC AAGCATTTGT TCGTGGTATT GAGCAGCAGG GAAATATCAG CATTAAATGG CTCGAAGAAA GTAAACCCGT AAGTTGTCTT GCGCATTATC AACAAAGTTC AGAAGCAGAA AAAATAGCGC AATCTATTAT TCTGAATGGA ATTCGGTGTC AGATTCAGTA A
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Protein sequence | MTIKPTKNYH NHLTRIATFC ALLYCNSAFC AELVEYDHTF LMGQNASNID LSRYSEGNPA IPGMYDLSVY VNDQPIINQS ITFIEIEGKK NAQACITLKN LLQFHINSPD INNEKAVLLA RDETLGNCLN LTKIIPQASV RYDVNEQRLD IDVPQAWVMK NYQNYVDPSL WENGINAAML SYNLNGYHSE TPGRRNDSIY AAFNGGMNLG AWRLRASGNY NWMTDSGSNY DFKNRYIQRD IASLRSQLIL GESYTTGETF DSVSIRGIRL YSDSRMLPPT LASFAPIIHG VANTNAKVTI TQGGYKIYET TVPPGAFVID DLSPSGYGSD LIVTVEESDG SKRTFSQPFS SVVQMLRPGV GRWDISGGQV LKDDIQDEPN LFQASYYYGL NNYLTGYTGI QITDNNYTAG LLGLGLNTSV GAFSFDVTHS NVRIPDDKTY QGQSYRVSWN KLFEETSTSL NIAAYRYSTQ NYLGLNDALT LIDEVKHPEQ DLEPKSMRNY SRMKNQVTVS INQPLKFEKK DYGSFYLSGS WSDYWASGQN RSNYSIGYSN SASWGSYSVS AQRSWNEDGD TDDSVYLSFT IPIEKLLGTE QRTSGFQSID TQMSSDFKGN NQLNVSSSGY SDNARVSYSV NTGYTMNKAS KDLSYVGGYA SYESPWGTLA GSVSANSDNS RQVSLSTDGG FVLHSGGLTF SNDSFSDSDT LAVVQAPGAQ GARINYGNST IDRWGYGVTS ALSPYHENRI ALDINDLEND VELKSTSAVA VPRQGSVVFA DFETVQGQSA IMNITRSDGK NIPFAADIYD EQGNVIGNVG QGGQAFVRGI EQQGNISIKW LEESKPVSCL AHYQQSSEAE KIAQSIILNG IRCQIQ
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