| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_02542 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001307 |
|---|
| Strand | + |
|---|
| Start bp | 4220464 |
|---|
| End bp | 4221384 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | pectate lyase (Eurofung) |
|---|
| Protein accession | CBF87063 |
|---|
| Protein GI | 259487973 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTTA AGCAGCTTGC CGTCCTCTCT TTTGCCACCA GCGCGCTGGC CGCGCATGGC
GTCCGCAATC CCGGCACCAA CAGCCTCAAC TTCAACCGCA TCGACAAGCG CTTCACCTTC
CCGATCCCCG AGTCGCAGGG CAGCCAGACC TTTGAGGCGA CCTACACGAT CTCTGGCAAC
GAGACCTTTG ACGGCGGCAT GAAGACCTAT GGTCGGGGTG TCGACTGCTC CGGCCAGGCC
GAGGGAGGCG ACTCGGATGC CGTGTTCATA GTGAAGGACG GTGGCACTCT TAAAAACGCC
ATCATCGGTG CTGATCAGAT TGAGGGTGTC CACTGCGAGG GATCCTGCAC GATCGAGAAT
GTCTGGTGGG AGGCCGTCTG CGAGGACGCT CTGTCTCTCA AGACCGGTGA TGGCCCTTTC
ACCGTCATCG GCGGTGGTGC GCAGAACGCC GACGACAAGG TACCTACCTC TCCTGCTGAG
GTCTCGAGTA AGTGAAATGC TGGTGCTAAA AGAGGAGAAT AGGTCATCCA GCACAACGGC
GGCGGCACGG TCAGCATCTC CGGCTTCACG GCCTACAACT TCGGCAAGCT GTACCGGTCG
TGCGGCAACT GCGACGAGAT GTACGAGCGC CATGTTACGC TGGAGTCGGT CACTGCTGTG
TCTGGCTCTG CGTCGCTGGT TGGTATCAAC AGCAACTACG GCGACACTGC GACCATCAAG
AGCGACACTT GCGTGACCGA CGTGGACACT GTCTGCACGG AGTACGAGGG CACTGACAAC
AACGACGAGG AGGTACGTAT CTCCAAGTGA GGCGTGATGA AAGTGCAGTA TGCTAACGAT
ATGCGATGCG GACAGCCCCA GGAGATCAGC ACCGGCCCCA GCAACGCTTG CCAGTACACC
GACCCCCTTC CTTCGTGCTA A
|
|---|
| Protein sequence | MFFKQLAVLS FATSALAAHG VRNPGTNSLN FNRIDKRFTF PIPESQGSQT FEATYTISGN
ETFDGGMKTY GRGVDCSGQA EGGDSDAVFI VKDGGTLKNA IIGADQIEGV HCEGSCTIEN
VWWEAVCEDA LSLKTGDGPF TVIGGGAQNA DDKVIQHNGG GTVSISGFTA YNFGKLYRSC
GNCDEMYERH VTLESVTAVS GSASLVGINS NYGDTATIKS DTCVTDVDTV CTEYEGTDNN
DEEPQEISTG PSNACQYTDP LPSC
|
|---|
| |