Gene ANIA_10972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagANIA_10972 
Symbol 
ID
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameAspergillus nidulans FGSC A4 
KingdomEukaryota 
Replicon accessionBN001304 
Strand
Start bp1970340 
End bp1972133 
Gene Length1794 bp 
Protein Length516 aa 
Translation table 
GC content52% 
IMG OID 
Productcholine transport protein, putative (AFU_orthologue; AFUA_2G15150) 
Protein accessionCBF79670 
Protein GI259483902 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.815116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACAG TCCAAGAAAC CAAGTCATCA GCATCCAAAG CCGACTATGG AGCAACATCC 
ATTCCAGATG TTGAATTGGT GAAGGGCGAG GTGGGTATAG CAGACCAGCT GGAGATGCCC
ATGAAGCGCA AGTTCAACAT CCTGAGCATC ATCGCCGTGG GTTACAACAT CTCGAACAGC
TGGGTTGCTA TTGCTGCTAG TTTTGCCATC GCTATCCAGT CAGGCGGTGC CTTGTCTTTG
CTTTATGGCA TCATCGTCGT CACCTTTGCC ATGCTCTGCA CGGGCGTGAC GCTCGCTGAA
CTTGCCAGCG TCTATCCTAC CGCTGGTGGG CAATACCACT TCACATCCAT CTTGGCCTCT
CGCCGATGGA GTCGAGGACT GTCGTACTTC AGCGGCCTTG CGGCCATATT CTCTTGGATA
TGCCTGGGTG CGTCCATTGG ACTGTCAGGG ACGAACGCTC TGATGGCGAT CATTATTCGC
TGGCAGCCCG CATATCAGCC CGCGTCGTGG CATTACTTTC TTGTCTATCA GCTATTCAAT
ATACTCGTCG TAGTATACAA TATGTACCTA GCCAACAAGA CGCTCTGGAT ATACAATATT
GGATGTGAGT TCCTGCCCTC CAAGGACGGC TCGATTCGTC GCCGCTAACA GCTATGCTCT
TGCTCCAGTT GTCCTTTCCA TTTCCACGTT TATTGTCATT ACTGTTGCTT GTCCAGCTCG
CTCGGAAGTC CACGTTGACT CGAAGGAAAT ATGGGCGATA ATGACGAATG GATCCGGTTG
GTCAGACGGC ATATCCTTCT TAACCGGCTT GTCAACGCCC CAGTTCATGC TGTCCGGCAT
TGATGCCACG CTCCATCTTG CAGAGGAGTG TCTTGACCCC GAACGCGTCG TACCAAAGGC
GGTGCTGGCC ACCGTCATTG TAGGGTTTCT GACTGCTTTC CCCTTTGCTA TCGCGATCAG
CTATAGCTAC CGCGACGTTG CAGAGTCGTT GTCCACCAAC ACTGGGTGAG TATGCAGTCG
ACCTCTTGCC CATATACCTC CCAGAAAGTT CCTAATTGGC GGCCAATCCA GGTTCCCTAT
CTTCTTCATC TGGGAAAAGG CCACTCATTC CCCAGCCGCC GCAACTGTGT TCATGGCTTG
CCTATTTGTC ATCTCATGTG TTGCATTTAA CGCTGTGCAC CAGACAGCTT CGAGACTTAC
CTGGTCCTTT GCTCGTGATG ACGCCCTCTT CTTCTCAAAG AAACTCTCAC CCGTCCACCA
TTCCCTCGGT GTGCCCGTTA ATGCGCTTGT GCTCGATGGA ATACTTGTCT TCCTCGTCGG
GATTGTCTAC ATATGCTCCT CAACAGGTAC GCCAGTCTCT CACAACCTAC TGTCCCAGAA
ATCGTGTAAG TTAACAGTGA ATATAGCCTT CAATTCCTTC ATCAGCACTA CCGTGATTGT
CGCGCAAGTC TCCTTTGCCA TCCCCGCCCT TCTCGTGATC CTTCGCCGCC GGTCAAGTCA
CTTCCTCCCT GAAAGTCGAC CATTCAGGGT CCCAAATGTG GTGGGATATA TCTGCAACGT
GGTTTGCATT ATCTGGGCAG TCATATTGAC TGTGTTCTTC TGCTTTCCCG CAGCCCTTCC
GGTCACGGGA GGAAATATGA GTAAGCTGCC CCATATAATC CAGAACAATC GCGGCTGCTG
ATTATATCCT CAGATTATGC GTCGGTTGTG TTGGTCGTGA TGCTTATTAT AGGAGTGGCG
AATTGGTTCG CTTACGCGAG AGGCCATTAT CGCGGGCCAA GGCTGGAGAT GTAG
 
Protein sequence
MDTVQETKSS ASKADYGATS IPDVELVKGE VGIADQLEMP MKRKFNILSI IAVGYNISNS 
WVAIAASFAI AIQSGGALSL LYGIIVVTFA MLCTGVTLAE LASVYPTAGG QYHFTSILAS
RRWSRGLSYF SGLAAIFSWI CLGASIGLSG TNALMAIIIR WQPAYQPASW HYFLVYQLFN
ILVVVYNMYL ANKTLWIYNI GFVLSISTFI VITVACPARS EVHVDSKEIW AIMTNGSGWS
DGISFLTGLS TPQFMLSGID ATLHLAEECL DPERVVPKAV LATVIVGFLT AFPFAIAISY
SYRDVAESLS TNTGFPIFFI WEKATHSPAA ATVFMACLFV ISCVAFNAVH QTASRLTWSF
ARDDALFFSK KLSPVHHSLG VPVNALVLDG ILVFLVGIVY ICSSTAFNSF ISTTVIVAQV
SFAIPALLVI LRRRSSHFLP ESRPFRVPNV VGYICNVVCI IWAVILTVFF CFPAALPVTG
GNMNYASVVL VVMLIIGVAN WFAYARGHYR GPRLEM