Gene lpp1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp1287 
SymbolrluD 
ID3117359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand- 
Start bp1432752 
End bp1433717 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content39% 
IMG OID637579982 
Productribosomal large subunit pseudouridine synthase D (pseudouridylate synthase) (Uracil hydrolyase) 
Protein accessionYP_123611 
Protein GI54297242 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGC ATATCCAGCA ACAATTATCA GTACCTCGTG AATTACATAA CCAACGAGTA 
GATAGCGTGC TTGCCAGGCT GCTCCCTGAG TATTCACGCT CTCTTATCTG TAACTGGATT 
AAAACAGGTG CTGTTACCCT TAATAATCTG CCTTGCAAAC CCAAAGATAA AGCGCTGGGC 
GGTGATTTAA TTACGATTAA TGTTGACCAT ACAATAGTTA ATACAGATTT TAACTTGTGT 
AAACCTGAGA ACATTCCAAT TCAGATAATC TATGAAGACA GTGAAGTAAT TGTTGTTAAC 
AAGCCAGCCG GTCTTGTTGT ACATCCGGGT GCGGGAAACA AGGAACATAC ACTCGTTAAT 
GCGCTGCTTC ATCATTGTCC CGAGTTGCAA CTACTTCCTC GTGCTGGAAT TATTCACAGA 
TTGGATAAAG ATACCACTGG TCTGCTGATA GTGGCTAAAA ACCTGATTAG CCATACTTCT 
CTCATCAGGC AAATGCAAAA TCGCGAAATT AAGCGCCACT ATCTGACATT AGTTCATGGT 
TATGTCATTT CTGGTGGGAC AATAGATACG GGTTTTGGCA GGCATCCCAA AAATAGACTA 
AAGATGGCTG TAACTGACTT CGGGCGTCAA GCTGTTACCC ATTATAATAT CAATAAGCAT 
TATAAAGACT TTACCTTACT GAATGTTAGC TTAATGACAG GACGGACTCA TCAGATAAGA 
GTGCATATGA ACTATATTAA CCACCCGGTT GTAGGAGATC AACTGTATGG AGGAAGAATG 
AAGTTTCCTC CTAATGCTGA TGAGGCAATA CTCTCAGTTT TAAAACAATT TAAAAGACAA 
GCACTTCATG CCTGTTCCAT TTCATTTTGT CATCCTGTAA AAAATACAGA AATAACACTG 
AATGCATTAT TACCCGATGA TTTCGAACTC TTGTTAAACA CTCTGGATCA ACACGATGAA 
AAATAG
 
Protein sequence
MIEHIQQQLS VPRELHNQRV DSVLARLLPE YSRSLICNWI KTGAVTLNNL PCKPKDKALG 
GDLITINVDH TIVNTDFNLC KPENIPIQII YEDSEVIVVN KPAGLVVHPG AGNKEHTLVN 
ALLHHCPELQ LLPRAGIIHR LDKDTTGLLI VAKNLISHTS LIRQMQNREI KRHYLTLVHG 
YVISGGTIDT GFGRHPKNRL KMAVTDFGRQ AVTHYNINKH YKDFTLLNVS LMTGRTHQIR 
VHMNYINHPV VGDQLYGGRM KFPPNADEAI LSVLKQFKRQ ALHACSISFC HPVKNTEITL 
NALLPDDFEL LLNTLDQHDE K