| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl2104 |
|---|
| Symbol | |
|---|
| ID | 3114929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Lens |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006369 |
|---|
| Strand | + |
|---|
| Start bp | 2384922 |
|---|
| End bp | 2388080 |
|---|
| Gene Length | 3159 bp |
|---|
| Protein Length | 1052 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637583878 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_127439 |
|---|
| Protein GI | 54295024 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG CTCTTTTCTT TATTGATAGG CCTGTATTCG CAACAGTAAT CTCCATCATC
ATTGTTATGG TGGGGGTATT GTCCTATTTC AACTTACCAA TAGAACAATA CCCGCAAGTA
GTTCCTCCTA CGATTCAGGT ACAAGCTTCT TATCCTGGAG CTAATGCAAA AACAGTAGCT
GAAACCGTGG CAACCCCCAT TGAACAGGAA GTTAACGGGG TGGAAAACAT GCTGTATATG
GACTCCCAAT CCACTGATGA TGGACAAATG CGTCTGACCA TTACTTTTAA GCTTGGAACA
GATCTGGATC AGGCGCAGGT ACTGGTGCAA AACAGGGTGG CAGTTGTGGA ACCCAAATTA
CCTGAAGAAG TCCGCCGCTT AGGAATCACT ACTAACAAAA ATTCACCTGA TTTGATGTTG
GTAGTGAATC TGTACTCCCC TAATGGTCAA TATGATCAAA CCTACATCGG CAATTACGCT
ATCTTGCATA TACGCGATAA AATCAGACGA ATTGAAGGTG TAGGTAATGT ACTCGTATTT
GGAGCCAGTG AATATGCCAT GCGTCTTTGG CTGAATCCCG ATTTAATGAA TACTTTTAAT
TTAACCGCAA ATGATGTTTT AGCAGCTGTT CGTGCTCAAA ACGTGCAAGT CGCCAGCGGC
AAGCTTAATT TGCAACCCCA GAAAAATCAA TACGGTTTCG AGTACCATAT TGAAACCAAA
GGACGCCTGG TTAAAAAAGA AGAATTTGAG AATATTATTG TCAAATCAGG TGAAGGCGGG
CGTATCGTTC GCCTGAAAGA CATTGGTCGC GTCGAGTTAG GTACGCAAAA TTACCTGACG
AAAGGTTATT TAGATAAATA TCCTGCTGTT GCATTACCTA TTTATCAACG CCCAGGAACC
AATGCATTAG CCACCGCACA AGAAATCATT AAAACCATGA AAACAATTGC CAAGGATTTC
CCGCCTGGCA TTACCTATGA TATTGCCTAT AATCCTACTC TATTTGTTCA ACAGTCGATC
GACGCAGTAT TTCATACCAT TTATGAAGCG ATTGCTCTGG TTGTACTCGT CATTTTGATT
TTTCTACAAA CATGGAGAGC CTCTGCCATT CCAGTAGTAG CTATTCCTGT ATCATTGATA
GGAACTTTTG CCGTGATGCA GGCGATTGGA TTTTCATTGA ATTACTTGAC CTTGTTTGGA
CTTGTTCTTG CTATTGGTAT TGTGGTTGAT GATGCCATTG TCGTTGTCGA AAATATGGAG
CGTAATATCC AGGCAGGCAT GAATCCCCGC GATGCCGCCA GAAAAACCAT GACAGAAGTA
GGATCAGCAT TAGTTGCTAT GGGTTTGGTG TTGATTGCCG TGTTTTTACC TACCGTTTTT
CTGGAAGGAA TTTCCGGGCG TTTTTATCAA CAATTCGGTA CAACGCTTGC TGTCGCAACT
GCCATTTCTG TTTTTGTCTC GTTAACCCTG ACTCCAACCA TGGCGGTATT ATTGCTTCGC
GCTCATCACG AAACTATAAA ACAAGAAGGA TTAGCCTGGT GGAGAAAGCC AATATATGGA
TTTTTGCATG GATTTAACCG ACTAATGGAA GGATTTTCCC GGCAATATGG GAAATTGGTT
GCTACCCTCA CACGTAAAAC GGCTTTAATG ACTATTGCTT ATGGTATCTT TATTTCCATC
ACACTCCTTC TATTTGTCTA CGTACCACGC GGCTTTATCC CGAGACAAGA CCAAGGCTAT
TTTATCGTTG CGGTTCAATT GCCGCCCGGA GCCTCTTTGA GCCGTACCGA TGCTGTCATC
AACAAAGCGG TCAACAAAAT ATTGGCGATT CCTGGTATTG CCCATACCGT TAGTTTTACC
GGCTTTTCTG GCGCTACATT TACTAATTCA TCAAATGCCG GAGCAATTTT TACCCCCCTA
CTGTCATTTC AAGAAAGGCA ACGTATGGGG ATAAATTATA ACGATATTCT TAAGCGTCTA
AGGCAGGAAT TAAGTACCAT CAAGGAAGCC CTCATCGTGG TTATCCCTCC TCCCCCAGTT
CGAGGTATTG GAAATGCAGG TGGTTTTAAA ATGATGCTTC AAGACAGGGG TGGTCGAGGT
CTTGATGTAT TAATGGAAGC AGCAGCAACA ATGGTTAATG CAGCGAATCA GGAAAAAGCC
ACCACATCAG TATTTACTTT TTTTGAAAAT TCAACACCAC GACTTCACTT AAAACTTGAC
AGAGAAAAGG TGGAACGACT TAACGTGCCT TACGCCAATG TCGTGGAAGC ACTGGAAGTT
TACCTTGGTT CTGTTTTTAT TAACGAATTC AATTACCTGG GACGTACTTT TCGTGTTATT
GCACAAGCTG ATTCAGAATA TCGGCATACT GAAGATGATA TTTTGCGAAT CAAAGTCAAA
AGCAACAACG GAGACATGGT TCCTATAGGC TCGGTTGCGC AAATAGAAAA TACGGTTGCT
CCCTCGCGCA TGCCTCGTTT CAATCTGTAT CCCGCTATTG ATTTGCAGGG TGATGTTGCT
CCCGGATACA GTTCTGATGA AGCGCTGGTG ACCATGGAAA AACTGGCTCA GAACAATCTT
CCAGACGGGA TTGGTTATGA GTGGACAGAA ATAGCCTATC AACAGAAAAT GGTAGGTAAT
ACTGCTTTGA TGGCTTTTAC TCTGGGTGTT ATTTTTATTT TCCTTGTCCT TGCTGCTCAA
TATGAAAGCT GGTCTTTACC TTTAGCCGTC ATATTAATTG TACCGATGTG TCTCTTTTCT
TCCATGCTGG GAGTTAAAAT TCTCGGGATG GAAAATAATA TTATGACTCA AATTGGTTTT
CTGGTTTTGA TTGGACTTGC ATCGAAAAAT GCCATCCTCA TTGTGGAATT TGCGAGACAA
CTTGAAAATC GGGGCTATAA CCTCTGGAAA GCTGCCATTC AGGCAGCAAA ACTTCGTCTA
CGCCCGATTT TGATGACCTC ATTTGCATTT ATTCTCGGTG TTTTTCCCTT GATTATCTCA
ACAGGGGCAG GCGCTGAAAT GCGCCGAGCG CTCGGTGTCG CTGTATTCAG CGGGATGTTG
GGAGTAACTT TTTTTGGCCT TATCTTTACG CCTTTGTTTT ATGTTTTAAT TAGTCGCTTG
AGTAGATATA AGCGGAAATT GACCAGGCCT GAGAAATGA
|
|---|
| Protein sequence | MKIALFFIDR PVFATVISII IVMVGVLSYF NLPIEQYPQV VPPTIQVQAS YPGANAKTVA
ETVATPIEQE VNGVENMLYM DSQSTDDGQM RLTITFKLGT DLDQAQVLVQ NRVAVVEPKL
PEEVRRLGIT TNKNSPDLML VVNLYSPNGQ YDQTYIGNYA ILHIRDKIRR IEGVGNVLVF
GASEYAMRLW LNPDLMNTFN LTANDVLAAV RAQNVQVASG KLNLQPQKNQ YGFEYHIETK
GRLVKKEEFE NIIVKSGEGG RIVRLKDIGR VELGTQNYLT KGYLDKYPAV ALPIYQRPGT
NALATAQEII KTMKTIAKDF PPGITYDIAY NPTLFVQQSI DAVFHTIYEA IALVVLVILI
FLQTWRASAI PVVAIPVSLI GTFAVMQAIG FSLNYLTLFG LVLAIGIVVD DAIVVVENME
RNIQAGMNPR DAARKTMTEV GSALVAMGLV LIAVFLPTVF LEGISGRFYQ QFGTTLAVAT
AISVFVSLTL TPTMAVLLLR AHHETIKQEG LAWWRKPIYG FLHGFNRLME GFSRQYGKLV
ATLTRKTALM TIAYGIFISI TLLLFVYVPR GFIPRQDQGY FIVAVQLPPG ASLSRTDAVI
NKAVNKILAI PGIAHTVSFT GFSGATFTNS SNAGAIFTPL LSFQERQRMG INYNDILKRL
RQELSTIKEA LIVVIPPPPV RGIGNAGGFK MMLQDRGGRG LDVLMEAAAT MVNAANQEKA
TTSVFTFFEN STPRLHLKLD REKVERLNVP YANVVEALEV YLGSVFINEF NYLGRTFRVI
AQADSEYRHT EDDILRIKVK SNNGDMVPIG SVAQIENTVA PSRMPRFNLY PAIDLQGDVA
PGYSSDEALV TMEKLAQNNL PDGIGYEWTE IAYQQKMVGN TALMAFTLGV IFIFLVLAAQ
YESWSLPLAV ILIVPMCLFS SMLGVKILGM ENNIMTQIGF LVLIGLASKN AILIVEFARQ
LENRGYNLWK AAIQAAKLRL RPILMTSFAF ILGVFPLIIS TGAGAEMRRA LGVAVFSGML
GVTFFGLIFT PLFYVLISRL SRYKRKLTRP EK
|
|---|
| |