Gene YpsIP31758_B0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_B0092 
Symbol 
ID5384259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009705 
Strand+ 
Start bp102713 
End bp103843 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content44% 
IMG OID640857201 
Productputative integrase family protein 
Protein accessionYP_001393390 
Protein GI153930721 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value0.967916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC TGATAAAACA CAGCAGTAAC TTTTTAGCCG CGATCTCGCC GGACAACGAT 
TGCTCTATCA CAGCAACGAA TGACTTCGAA GCGATGATGT CATGGCTTAA TGGGTATAAA 
AAAAAGCCAA TCAATACATC AAGAAACTAC GCGAGAGAAG TTAAGCGCTA CCTCATTTGG 
CTATCATGCC AAGGTTTAAC GCTAGCTCAG GTAAAAATTG AGGACGTCTA TGAGTATTTT 
AACCTACTAG AACGCCCAAC AACTGAGTGG ATCATTCCAG ACAAAAAGAC CGACAAAATA 
TACCCAACTC AACTGATCAA GTATGGTGGC TTATCTAATC GCTCAATCAA CTATACCCAC 
ACCGTACTTG GCCTATTTTA CTCATTTCTG CAAGATGCAG GCTATTTAAC GAAAAACCCG 
ATAAATCTGG TCAAAAAAGC CAGCGCAACT ACTGAAAGTG AGCAATATCG GCATTTAGAC 
TTACCCGCTT GGCAAACTCT TTGGACTTGG ATACTGGGGT ACGAGAACCG CGTAATCACA 
GAGGATCAAC CAGCCAAGAT GATAAAAAAA GCGAGTCGCT ACCGATGGGT GTTTGCCTTG 
CTCTACCATT CTGGCATTCG CTGTGCAGAA GCGGCAAACG CGCTGATGAG TGATTTAGTT 
CGTAAAAACA ATACATGGTC TCTGAAAGTC ACGGGTAAAG GAAACAAAAT GCGACTTGTG 
ACTGTAAACA GCCTTCTGCT GAAAGAGCTG ATCCACTATA GGCGCTCCCT TCTTTTAACT 
GACTACCCTT CAAGTCATGA TGATACCCCC TTGATCGTCT CGATACAGAA AAACAGACAA 
GGCTCCATGA CGACAAGAAC ACTGTCTTCA TTAATCAAAG AGGTGACAGA GCTGGTATGC 
GCAGATTGCC AAGATGATCA AATCACTCGT CAGATTGAAA CCATGACGAC TCACTGGTTA 
CGCCACACTA ACGCGACACA CCGTTTTATG GCAGGAGCCA GCCTTGAAAC AACCCAAGAT 
GAGTTAGGCC ATGCAGACCC AAGAACAACA CGTATTTATG CCAAGACATC GAACGAAAAA 
AGGAAATTAG ATGCCGAAAG ACTGGCTGAT TTATTTGATG GCATCGGTTG A
 
Protein sequence
MSELIKHSSN FLAAISPDND CSITATNDFE AMMSWLNGYK KKPINTSRNY AREVKRYLIW 
LSCQGLTLAQ VKIEDVYEYF NLLERPTTEW IIPDKKTDKI YPTQLIKYGG LSNRSINYTH 
TVLGLFYSFL QDAGYLTKNP INLVKKASAT TESEQYRHLD LPAWQTLWTW ILGYENRVIT 
EDQPAKMIKK ASRYRWVFAL LYHSGIRCAE AANALMSDLV RKNNTWSLKV TGKGNKMRLV 
TVNSLLLKEL IHYRRSLLLT DYPSSHDDTP LIVSIQKNRQ GSMTTRTLSS LIKEVTELVC 
ADCQDDQITR QIETMTTHWL RHTNATHRFM AGASLETTQD ELGHADPRTT RIYAKTSNEK 
RKLDAERLAD LFDGIG