Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3934 |
Symbol | |
ID | 5386273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 4411923 |
End bp | 4412903 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640866965 |
Product | heptosyltransferase family protein |
Protein accession | YP_001402882 |
Protein GI | 153946826 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCGCA TCTTGGTGAT CCGAATTGAT TTTCTCGGCG ATATGGTTTG TACCACGGCG CTATTACATG CGCTGAAACA ACGTTGGCCA GCAGCAGAAA TCCACGTATT AGCGAATAAA TATAATCAAT CCGTGCTGGC ACGTAATCCT GATGTCAGTG CGGTCCACAC TTATGTTTAC AGCAAACAAT GTGAGAGAAA CCCGCGGCCA GGCCGGCTCA TGGCCCTTTT TGATCGGCTA GCATTAATTT GGCGGCTACG GCGTTTAGGC TTCGATCTGC TGCTCATTCC CAATGGTGGC ATGAACAAAA ACAGTATTCA GTTTGCCAAA CAGCTCAATG TGGCAGATCG CCGTTGGCAT ACGGCTGAAA CTGAGTTTGA CGACCGTAAT CCTGAACATG TTGCCACGCG GCCAATCCGT CACGAAGCCC TCTCGGGATT TGCACTGATG CCTGAACTGG GGCGGGTAGA CATCGAAACA CTTAAGCTGC ATGTCTACCC AGAGCCACAA TTGCAGGCAA AATGGCGGGC CGATCTTGGG GAAAAAGACC GGCCACGTGT CGGGCTATTT ATCTCTAATA AATCCGCCCA ACGGCGCTGG AGTTGGGATA AGTGGCGTCA ATTGGCATTG AAACTCAATG CACAGGCTGA ATTGCTCATT TTTCATGATC CAGCAGAACA ACCATCCGAG CAGCAATTAG CGGGGCTAAC CGCCCGTTGT CTGTCAACGC CATCCACTGA CGACCTGATG GCGGCGATGA GCCAGTTGGA TTTGGTGATT TCCGCCGACA GCGCACCGGT ACATATCGGC TCCGCATTAC AAATACCCGT GGTGGCCTTG TTTGAATCCC GGCCAGAGAA GTACCTACGC TGGTATCCGC TAGGTGTTCG CCATGTGGTC GTCCATGCCG GGCCACAAGT TGAAGACATC CATGTTGATG CTGTCGAGTC TGCCGCCCGT TCACTGTTGA CCACAGATTA A
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Protein sequence | MQRILVIRID FLGDMVCTTA LLHALKQRWP AAEIHVLANK YNQSVLARNP DVSAVHTYVY SKQCERNPRP GRLMALFDRL ALIWRLRRLG FDLLLIPNGG MNKNSIQFAK QLNVADRRWH TAETEFDDRN PEHVATRPIR HEALSGFALM PELGRVDIET LKLHVYPEPQ LQAKWRADLG EKDRPRVGLF ISNKSAQRRW SWDKWRQLAL KLNAQAELLI FHDPAEQPSE QQLAGLTARC LSTPSTDDLM AAMSQLDLVI SADSAPVHIG SALQIPVVAL FESRPEKYLR WYPLGVRHVV VHAGPQVEDI HVDAVESAAR SLLTTD
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