| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3813 |
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| Symbol | |
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| ID | 5385630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4298528 |
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| End bp | 4298809 |
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| Gene Length | 282 bp |
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| Protein Length | 93 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640866837 |
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| Product | HrpO family type III secretion protein |
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| Protein accession | YP_001402767 |
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| Protein GI | 153949767 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4794] Type III secretory pathway, component EscS |
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| TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGCT ACCACGAGAA TGCCATCATT GTTCATCTGG CCACTGAGTT GTTATGGCTG
GTTTTACTCC TCTCTCTGCC CGTAGTCGTG GTGGCTTCAA CGGTCGGGTT GGTGATTAGC
CTGGTACAAG CCCTGACCCA AATACAGGAT CAAACCCTGC AATTTTTGAT TAAGTTGTTG
GCGGTATCAG CCACATTACT GATGACCTAC CATTGGATGG GGGCGACATT GCTGAATTAT
ACCCAGCAGA GTTTTTTGCA GATAACCAGT ATGCGGCCCT GA
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| Protein sequence | MSSYHENAII VHLATELLWL VLLLSLPVVV VASTVGLVIS LVQALTQIQD QTLQFLIKLL
AVSATLLMTY HWMGATLLNY TQQSFLQITS MRP
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