Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3555 |
Symbol | |
ID | 5387683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 4016677 |
End bp | 4017393 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640866571 |
Product | ABC dipeptide/oligopeptide/nickel transporter, ATP binding protein |
Protein accession | YP_001402509 |
Protein GI | 153947737 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCACTGA TTGAAGTGAA CAATTTGCAG GTCAGCTTTG CCCAGAAGAA CCAGATCAAA ACAGCGGTTG AATCGGTCAG TTTTGCGGTT GAAGCCAATG AAACATTCAG CCTGATCGGG GCATCTGGCT GTGGAAAATC CACCGTCTTG CGGACATTGG CCGGGTTACA GCGCGAATGG CAGGGAGAAA TCACCTTGCT GGGCCAGCGG TTACAGCCGG GCCAACGTTT CACCGGCCAA CTACGTAAAG ATGTGCAGAT GGTGTTTCAA GATCCGTATG CCTCGCTGCA CCCTCAACAT AATATTCAAC GCACCTTAGG TGAGCCGTTA AAGATCCACG GCGAGAAAAA TATCGCTCAG CGAATTGCGC AGGCACTAGA ACAAGTGGGT TTGCCTGCAT CTGCCGCTTT ACGTTATCCC CATCAGTTCT CCGGAGGCCA GCGTCAGCGT ATCGCTATCG CCCGCGCTCT GCTGCTGCGG CCTAAATTGC TGCTGCTAGA TGAACCCACC TCAGCGTTAG ATATGTCCGT TCAGGCCGAA ATTCTTAACC TGCTTAATCA TTTAAAACGC GAATACGACA TGACCTATTT GCTGGTCAGT CACGACAGCG ATGTCGTGGC ACATATGTCT GAGCGCGCAG TGTTGATGGA AAACGGCCAT ATTGTCAGGG AGTACTCACG GGAGGATTTA GCGTCGGCGG AGCATTCGAT GGGGTAA
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Protein sequence | MALIEVNNLQ VSFAQKNQIK TAVESVSFAV EANETFSLIG ASGCGKSTVL RTLAGLQREW QGEITLLGQR LQPGQRFTGQ LRKDVQMVFQ DPYASLHPQH NIQRTLGEPL KIHGEKNIAQ RIAQALEQVG LPASAALRYP HQFSGGQRQR IAIARALLLR PKLLLLDEPT SALDMSVQAE ILNLLNHLKR EYDMTYLLVS HDSDVVAHMS ERAVLMENGH IVREYSREDL ASAEHSMG
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