Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3452 |
Symbol | |
ID | 5387383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3888865 |
End bp | 3889479 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640866465 |
Product | LysE family translocator protein |
Protein accession | YP_001402407 |
Protein GI | 153946929 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGAAA CCTCGTTATT CGTCGCGACA CTCGCGACAT TGGGAATGAT CTCCCCCGGA CCTGATTTTT TTCTGGTGAT CAAAAACGCT GCCCGCTATC GCCGCACTGC CGCCATGATG ACGGCACTTG GTGTAATTTT GGGTGTTGCA ACACATATGT CTTACTGCGT GGCCGGTCTG GTGGTCGTTA TCACGACTAC ACCATGGTTA TTCAATTTGC TGAAATATGC CGGGGCCTGC TACCTGATCT GGATTGGTAT TCAAGCACTG CTGTCACGGG GAGAAAGTAA GTTTAGTATT GATAATACTG CACAGTATCC CATCTCGCTC AAAGCCACAT TTTTGCAAGG TTACCTCTGC AACTTATTGA ATCCCAAAGC AACTCTTTTC TTCCTCGCCG TTTTCACGCA AATATTGCAG ATAAACTCCG GCATAGGAGA AAAACTCTGG TATGCCTCAA TCATCTGGAT ACTGTCCGCA ATCTGGTGGC CTTTACTGGT GATCCTGATC CAAAGCGCGC CAGTACGCCG TGGTTTAGCC AAAACACAAA AAGTGGTCGA TAAAGTGTTA GGCGGCCTGT TGATCGGCCT TGGCATCAAA GTCGCATTAG GCTAA
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Protein sequence | MLETSLFVAT LATLGMISPG PDFFLVIKNA ARYRRTAAMM TALGVILGVA THMSYCVAGL VVVITTTPWL FNLLKYAGAC YLIWIGIQAL LSRGESKFSI DNTAQYPISL KATFLQGYLC NLLNPKATLF FLAVFTQILQ INSGIGEKLW YASIIWILSA IWWPLLVILI QSAPVRRGLA KTQKVVDKVL GGLLIGLGIK VALG
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