| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2946 |
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| Symbol | int |
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| ID | 5386597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3317905 |
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| End bp | 3318843 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640865952 |
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| Product | integrase |
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| Protein accession | YP_001401908 |
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| Protein GI | 153948003 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.00837646 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTCCG CGCTTGGCTG CTCACTGCTG CGAACCGGTA CAGGCATCGT TGCTTTGTAT
AACCGAATTA ATAGTGTCGC AGTTGTCACT GTATCAGATT GGGTTAAAAC TTATACAGAA
GTGCTAAGTA AGCGCGGATT AAAAAGCAAG ACGATCACTG GCTACAATAG TCGCTTGGAT
GTAGTCGATG AGGTTTTCGC ATCAAGGACT ATTGACAGTA TTAGCACTAA AGACATTGCA
ACACTTCTTA ACGATTACAC AAATAATGGA AAGGCGGCAT CTGCTAAGTT GATGCGATCA
TTTTTGACTG ATTTTTTCAG AGAGGCAGTA TCCGAGGGGA TTATTTACAA TAACCCCGTC
GATGCAACAA AAAACCCAAA GATAGAGGTT AAGCGCGCAA GGCTGTCGCT TGATAACTTC
CTATCCATTA GGGCGGCAGC GGCTGACATG CCGGGCTGGG TTGTTGATAG CATGGATCTG
GCTATAGTGA CAGGGCAACG TGTGGGGGAT GTTCGTAAAA TGAAGTGGTC TGATATTAAA
GATGATAAAC TTTTCGTTGA GCAGGAAAAG ACAGGAATGA GGATCATAAT CCCCTTTGAT
GTTAAGCTAG ATACCCTCTT GCTCTCTTTG CGTGATATCA TCGCGCGCTG CGAAAATCGC
GCAATCAAAG GCGAAACGAT AATTTCGTCC GACAAAGGTG AATCATTTGC AGATAAGACA
CTGACAAAGC GATTCGCCAA AGCGAGAGAT TTAGCAAACA TAACATGGGA AGGAATTAAC
CCACCGCCAT TTCATGAGAT ACGGAGTTTA GCTTCACGAC TCTATGAAAA GGAAATGGGT
AAAGAATTTT CTCAAAAAAT CCTCGGGCAT AAATCCGCAC AAACGACCGA TAAGTATCGC
GACGTTCGCG GAAGTGAATG GATCGAGATA GAAGTGTAG
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| Protein sequence | MLSALGCSLL RTGTGIVALY NRINSVAVVT VSDWVKTYTE VLSKRGLKSK TITGYNSRLD
VVDEVFASRT IDSISTKDIA TLLNDYTNNG KAASAKLMRS FLTDFFREAV SEGIIYNNPV
DATKNPKIEV KRARLSLDNF LSIRAAAADM PGWVVDSMDL AIVTGQRVGD VRKMKWSDIK
DDKLFVEQEK TGMRIIIPFD VKLDTLLLSL RDIIARCENR AIKGETIISS DKGESFADKT
LTKRFAKARD LANITWEGIN PPPFHEIRSL ASRLYEKEMG KEFSQKILGH KSAQTTDKYR
DVRGSEWIEI EV
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