| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2518 |
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| Symbol | |
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| ID | 5387552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2849918 |
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| End bp | 2851156 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640865508 |
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| Product | putative hydroxymethylglutaryl-coenzyme A synthase |
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| Protein accession | YP_001401486 |
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| Protein GI | 153947113 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
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| TIGRFAM ID | [TIGR01835] 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGTA TTGGTATTGA AAAAATCAGT ATCTACCCAA GTAGTTTGGC GCTGAAATTA
TCTGAATTGG CACAAGCACG TGGTGGGGAC AATAAATACA TTCAAGAATC TTTAATGGTC
ATAAAGCGCA GTTTGGTACC ACAGTGGGAA GATGCGGTCA CCCTTGCCGT CAATAGTGCC
AAGGATATGC TTAACGATCA GGATCGTTCG GATATCGGTT TATTTATCAT TGCAACAGAA
TCAGGTTTAG ACCAAGAAAA GGCCATCAGT ACTTGGGCGC ATCGTTATTT AGGATTACCT
GCGACTTGCC GTGTTTTTGA ACTGAAATCT GCCTGCCATG CTGGTGCTGC GGCATTAAAG
ATGGCTGAGT CATGGATATC GTCCGGCCTT AATCGAGGGA AAAAGGTATT ACTGATCAAC
GTGGATATCA GTAATAATAT GATTTGCCAC GGGAAGATGG AATATAGCCT TGGTGCTGGG
GCCATTGCTT TACTTATCTC AGATAATCCC GTTTTTGCCG TTATTGAAAC AGGGAAATCG
GGTATTCATA CTCATGAAGT GACGGATGTT ATTCGCCCAC TTCCCTGGAA AGAGGTCGCT
TTCGATGTAG AAGCCAGCCT TTTCTCTTAT ATGGATGGAC TCGAGAATGC TTTCGAGGAA
TATTGTCATC AGACACCGGA GGCCAGAGAA AGTACCTATT TCAATTATAA CTTATACCAT
GTCCCTTTCC CTGGCATTAG TAAAGAAGCA CATAAAGTAT TATTAGAACT ACAAGGACTC
TTTGGAAAAG AGGCGCTAGC CACTTCATTT AAGCAAAAAG TCATGCCATC CCTGTATTAC
GCGCAAAAAA TAGGCGCGAC CTATTGTGGC AGCATTTTCC TTTCCCTATT TTCACTTATG
GTGAAAGCAC CAGAGATTAA ATCAGGGGAT CGAATAGGGG TCTACTCTTA TGGTTCAGGA
TCCTGTGCCG AGTATTTCAG CATGCAGGTC GGGGACCAGG CAGTAGAGAT TGCACAACAG
CAAGGTGCAG CGTTGGACAT ACTGCTTACC CAGCGGAAAA TACTGGATGT GGCGGCATAC
GAGCAACTGG AAAATGCACG TAGCGCACAA ATGCAAGGTA AAGACTATCG TTTAGACGGG
GACAACTTAC AGGACTGGTA TACACACCAT TACAGCGGGA GTGGGCTCCT TATTCTTGAG
CGTATCGATA ACCACTTACG GCGTTATCGC TATGCATGA
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| Protein sequence | MNSIGIEKIS IYPSSLALKL SELAQARGGD NKYIQESLMV IKRSLVPQWE DAVTLAVNSA
KDMLNDQDRS DIGLFIIATE SGLDQEKAIS TWAHRYLGLP ATCRVFELKS ACHAGAAALK
MAESWISSGL NRGKKVLLIN VDISNNMICH GKMEYSLGAG AIALLISDNP VFAVIETGKS
GIHTHEVTDV IRPLPWKEVA FDVEASLFSY MDGLENAFEE YCHQTPEARE STYFNYNLYH
VPFPGISKEA HKVLLELQGL FGKEALATSF KQKVMPSLYY AQKIGATYCG SIFLSLFSLM
VKAPEIKSGD RIGVYSYGSG SCAEYFSMQV GDQAVEIAQQ QGAALDILLT QRKILDVAAY
EQLENARSAQ MQGKDYRLDG DNLQDWYTHH YSGSGLLILE RIDNHLRRYR YA
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