Gene YpsIP31758_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1821 
Symbol 
ID5387639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp2104306 
End bp2104884 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content41% 
IMG OID640864805 
Producthypothetical protein 
Protein accessionYP_001400796 
Protein GI153947298 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.129752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATA AGACCCTGTT GGGCCTGAGT CTTGGCGCAC TGATGTTTAC CGCCGGTAGC 
GCTGTAGCTG CCGATTATAA AATCGATAAA GAAGGGCAAC ACGCTTTTAT CGAATTCCGG 
ATTAAACATT TAGGTTATAG CTGGTTATAT GGCAGCTTTA ACGATTTTGA TGGTTCTTTC 
ACATTTGATG ATAAAAATCC TGCAGCTGAT AAAGTTAATG TAGTGATCAA CACCAATAGC 
GTTGATACCA ATCATGCTGA ACGAGATAAA CACTTACGCG GTAAAAGTTT TTTAAATGTT 
GCTAAATTCC CACAGGCAAC ATTTGAGTCA ACTGAAGTGA AGAAAAATGG TGATGGTTAT 
TCTGTTATCG GTAACCTGAC GTTAAATGGC GTGACTAAAC CGGTGACGTT GGAAAGTAAA 
CTGACAGGGC AGGGTAACGA CCCATGGGGG GGGTATCGTG CTGGTTTTGA AGCCAACGGT 
AACATCAAGT TGAAAGATTT CAATATTACG ACAGATTTAG GACCAGCTTC TCAAGAAGTC 
GAATTGATCC TGTCAGTAGA AGGTGTTCAG GTTAAATAA
 
Protein sequence
MINKTLLGLS LGALMFTAGS AVAADYKIDK EGQHAFIEFR IKHLGYSWLY GSFNDFDGSF 
TFDDKNPAAD KVNVVINTNS VDTNHAERDK HLRGKSFLNV AKFPQATFES TEVKKNGDGY 
SVIGNLTLNG VTKPVTLESK LTGQGNDPWG GYRAGFEANG NIKLKDFNIT TDLGPASQEV 
ELILSVEGVQ VK