| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1753 |
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| Symbol | |
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| ID | 5384879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2029883 |
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| End bp | 2031085 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640864736 |
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| Product | inner membrane transport protein YdhC |
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| Protein accession | YP_001400728 |
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| Protein GI | 153947618 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.000133845 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGT CATCCAGTTT CATGTTCTAT CTGGCCGGCC TGAGTATGCT GGGTTATTTG
GCCACAGACA TGTATCTCCC CGCCTTCGGT GCAATGCAAC GCGAACTGCA AACCACCGCC
GGTGCCATCA GCGCCAGTTT AAGTATTTTT CTGGCCGGTT TTGCCATAGC ACAGCTTATC
TGGGGGCCCC TTTCAGACAA ATTGGGCCGC AAGCCTGTCC TGTTAGCGGG TTTGGGGTTA
TTTGCCATCG GTTGCTTAGG GATGTTATGG GTTGAAAATG CCACTCAATT GTTGGTTCTA
CGCTTCATAC AAGCCGTGGG CGTCTGTTCA GCGGCGGTGA GCTGGCAGGC TTTAGTGGTA
GACCGCTATC GCGACGGGAA GGCCAACCGC GTATTTGCCA CCATAATGCC GCTGGTTGCC
TTATCACCCG CATTAGCGCC GTTATTAGGT GCCTGGTTAC TGAACCACTT CAGTTGGCGG
TCAATTTTTG TAGTTCTATT AGCCATTACA CTGCTCTTAC TGATCCCGAC AATGGTGCTG
CAAGAAAGGA AAAAAGCACG CGCCGATAAC AGCGATCAAC CTAAAAACAC GGTGAGTTTC
TGGCAACTGC TCCAATCACC CACATTCAGT GGCAACGTCA TGATCTTTGC TGCCTGTAGT
GCTGGCTTCT TTGCTTGGCT AACGGGTTCA CCTTTCATTC TGGAAAATAT GGGGTACAGC
CCAAATGTTA TTGGCTTGAG TTATGTCCCA CAGACGCTGG CTTTTCTGCT TGGTGGATTT
GGTTGCCGCA GTGCACTTGC CCACATAAAA GGGAACACCC TGCTACCCTG GCTGTTAGTG
GGCTATGCTG GCAGCATGAT TGCCCTGTAC TTGATCGCCA CCTTAACAAC GCCATCATTG
CTCACGTTGC TTATCCCTTT CTGCTTAATG GCGCTTGTGA ATGGTGCCTG CTACCCTATT
ATCGTAGCGA ATGCATTAAT GCCGTTTCCA GACAATACCG GCAAAGCGGC AGCCTTGCAG
AATACCCTGC AACTCGGTTT GTGCTTTGTG GCCAGTATGT TGGTATCGGC CTATATCAGC
CAGCCGCTCT TGGCGACAGT GACAGTGATG CTATTGACGG TAGTTTTGGC GGCTTTGGGT
TACGGCATCC ATTGTTACGC GTTACGTAAA GACAAAACCA GATTGATGAC TCGGACACCA
TAA
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| Protein sequence | MKTSSSFMFY LAGLSMLGYL ATDMYLPAFG AMQRELQTTA GAISASLSIF LAGFAIAQLI
WGPLSDKLGR KPVLLAGLGL FAIGCLGMLW VENATQLLVL RFIQAVGVCS AAVSWQALVV
DRYRDGKANR VFATIMPLVA LSPALAPLLG AWLLNHFSWR SIFVVLLAIT LLLLIPTMVL
QERKKARADN SDQPKNTVSF WQLLQSPTFS GNVMIFAACS AGFFAWLTGS PFILENMGYS
PNVIGLSYVP QTLAFLLGGF GCRSALAHIK GNTLLPWLLV GYAGSMIALY LIATLTTPSL
LTLLIPFCLM ALVNGACYPI IVANALMPFP DNTGKAAALQ NTLQLGLCFV ASMLVSAYIS
QPLLATVTVM LLTVVLAALG YGIHCYALRK DKTRLMTRTP
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