Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1730 |
Symbol | |
ID | 5384679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1999502 |
End bp | 1999846 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640864709 |
Product | SMR family multidrug efflux pump |
Protein accession | YP_001400705 |
Protein GI | 153947120 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCT ACCTACTCTT GCTGATGGTC AGTCTATTAA CCTGTATTGG GCAATTATGT CAAAAACAGG CTGCGCAGTG TTGGGAGCAA CCGCAGGCCC GGCGGTTGAA TCTGACATTG CGTTGGTTGG CGATAGCTGT AGTGTCACTT GGCTTGGGGA TGCTGTTGTG GCTGCGGTTA TTGCAGCAAC TCCCGCTGAG CGTGGCCTAT CCTATGCTCA GCTTTAATTT TGTGTTGGTT ACCTTGGCGG CACAACTATT TTACGGTGAA AAGGCCACTC TTCGGCATTG GTTGGGGGTT GCCGCTATTA TATTCGGTAT CTTGCTAATG AGTTGGCACC TATGA
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Protein sequence | MNSYLLLLMV SLLTCIGQLC QKQAAQCWEQ PQARRLNLTL RWLAIAVVSL GLGMLLWLRL LQQLPLSVAY PMLSFNFVLV TLAAQLFYGE KATLRHWLGV AAIIFGILLM SWHL
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