Gene YpsIP31758_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1730 
Symbol 
ID5384679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1999502 
End bp1999846 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content50% 
IMG OID640864709 
ProductSMR family multidrug efflux pump 
Protein accessionYP_001400705 
Protein GI153947120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGCT ACCTACTCTT GCTGATGGTC AGTCTATTAA CCTGTATTGG GCAATTATGT 
CAAAAACAGG CTGCGCAGTG TTGGGAGCAA CCGCAGGCCC GGCGGTTGAA TCTGACATTG
CGTTGGTTGG CGATAGCTGT AGTGTCACTT GGCTTGGGGA TGCTGTTGTG GCTGCGGTTA
TTGCAGCAAC TCCCGCTGAG CGTGGCCTAT CCTATGCTCA GCTTTAATTT TGTGTTGGTT
ACCTTGGCGG CACAACTATT TTACGGTGAA AAGGCCACTC TTCGGCATTG GTTGGGGGTT
GCCGCTATTA TATTCGGTAT CTTGCTAATG AGTTGGCACC TATGA
 
Protein sequence
MNSYLLLLMV SLLTCIGQLC QKQAAQCWEQ PQARRLNLTL RWLAIAVVSL GLGMLLWLRL 
LQQLPLSVAY PMLSFNFVLV TLAAQLFYGE KATLRHWLGV AAIIFGILLM SWHL